Novosphingobium sp. P6W: TQ38_027070
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Entry
TQ38_027070 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_027070
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_027070
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXB80250
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All DBs
Position
pP6W1:294788..297337
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AA seq
849 aa
AA seq
DB search
MTFDRVCLVSRINGLLLSSVAVSAFIWPATVQAQQQDPRTTSAVPEIIVTANRREERGQD
VPIAITAISPQRLEQQGVNKEQDLQATIPSLVVGPNGQGSRDSNSFTLRGQGATFQASPG
VVVYLNEVALPAGITLSQQGGPGNFIDLENMQVLAGPQGTLFGRNTTGGAVLLVPKKPSD
EFGGWVKGEYGSYDRTYLEGAVNVPLGEKLAIRAVGAYHDRDGYTRDVIWNKDRDDEHWY
SGRVGILFKPTEGITNYTMVYGAHSRNNGAGLINRGFNIPALAQVQLCAEAPVGAVGGYS
CDVYRATTAQADAWGPRKTGFSVDTYAKTQTWGISNTTDIELSDELTLRNIVSYQKMKVG
YRYDGDASILQQHDVDPGVLPADGVVTLPGTPFPVFYRNETLDSELPRDNFRVWSEELQL
QGNMLDSKLVWTIGGFYFDQRPDGLQGSRAITYCPAVQTGLCTASRAEYGTSTVSKALYA
QATVDFGAVTPSLDGLRLTGGYRHTWDHVYGFATQFNYSSLLPAGAVVCGKDSTQVVPEA
TALADCRFSGSQRTNSPSWLIGLDYKVTPDILLYGKVSHSYKAGGFNPYAVFFGQNGDPD
TRTFLPEKVTSYEIGMKSDFHLGTVPLRFNVAGYSTDFKGIQRATGDFNLATGAGGSRTL
NADARIRGVEVEASMRPFPGLEIGGNFSYTDAKYKDYTYVTGTGTVACNGVIAPGGTADA
SCLDFQYVSPYIWSVHVSAEQPLGDDMGMLALYAAYSHTSRQFTEAVNLPQNQPGAYLEA
FGLLNVSLDWRNVAGSKFDLGVFATNLVNKTYRVSNSDVYQGGGLLYWATLYGEPRMLGV
RLKYTFGGG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgatcgagtatgtctcgtttcgcgcatcaatggattgctgctgtccagcgtg
gcggtgtcggctttcatatggccagcgacagttcaggcacagcagcaagatccgcgcacg
acatccgcggtgcccgagatcatcgtcaccgcaaaccgccgcgaagaacgtggccaggac
gttcccatcgcgatcaccgcgatttccccgcaacgcctcgagcaacagggcgtaaacaag
gaacaggatcttcaggccacgatcccgtcgctggttgtcgggcccaacgggcagggctcg
cgcgattccaattccttcacgctgcgcggccaaggcgcgactttccaggcctctccaggt
gttgtcgtctacctcaacgaagtggccttgcccgctggcatcactcttagccagcagggc
ggacccggcaacttcatcgatctcgagaacatgcaagttctggccgggccgcaaggaacg
cttttcgggcgcaacaccaccggcggggcagtgctgctggttcccaagaagccgagcgac
gaattcggcggctgggtaaagggcgagtacggcagctacgaccgcacttacctcgaaggc
gcggtgaacgttcctctgggcgagaagctcgccatccgcgccgttggagcctaccacgac
agggatggttacacgcgcgacgtaatctggaacaaggaccgggacgacgagcactggtat
tccggtcgcgtcggcatcctgttcaagccgaccgaaggcatcacgaactacacgatggtc
tacggtgcccattcgcgcaacaacggggctggccttataaaccgcgggttcaacatccca
gcactggcacaggttcagctttgcgccgaggctcccgtaggtgccgtcggtggttactcc
tgcgatgtctaccgcgcgacgaccgcgcaggccgatgcctggggaccgcgaaagaccggc
ttttcggtcgacacttatgccaagacccagacttggggtataagcaatacgactgatata
gaactgagcgacgaactgacgctgcgtaacatcgtcagctaccagaaaatgaaagtcggc
taccgctatgacggcgatgccagcattctccagcagcacgacgtcgatcctggtgttctc
ccagcggacggcgtcgttacactgcccggcacaccctttcctgtcttctatcgtaacgag
acgctagattctgagcttccccgcgacaactttcgcgtctggtcggaagaacttcagctt
cagggcaacatgctggacagcaagctggtctggacaatcggcggcttctatttcgatcag
cgccccgatggcctacaaggttcccgcgccatcacctattgccccgccgtccagactggt
ctctgcacggcctcgcgggcggagtatggcaccagtacagtctccaaggcgctctatgcg
caggccaccgtcgactttggcgccgtcacgccttcgctcgatggacttcgcctgacaggc
ggctatcgccacacctgggatcacgtctacggtttcgcgacgcagttcaactacagtagc
ctgctgcccgccggcgccgtggtgtgcggcaaggacagcacgcaggtcgtgcccgaagcg
acggccctggcggattgccggttcagcggttcgcagcgcacgaattcgccctcgtggctg
atagggctcgattacaaggtcacgcccgatatcctactctacggcaaagtcagccacagt
tacaaggcagggggcttcaatccctatgccgtgttcttcggccaaaacggcgatccggat
acccgaacgttccttccggaaaaggttacgtcctacgagatcggcatgaagtccgacttc
catctcggcacggtcccgctgcgcttcaacgttgccggctacagcacggacttcaaggga
atccagcgcgccaccggtgacttcaatctggcaactggcgcagggggctctcgtacgctc
aacgccgatgcgcgcattcgcggcgtggaagtcgaagcctcgatgcggccgttccccggc
ctcgagatcggcggcaacttcagttacaccgatgccaagtacaaggactacacatatgta
accggaaccggcacggtggcttgcaatggcgtcatcgcaccgggaggcactgcggatgcg
tcctgcctcgatttccagtacgtctcgccctacatctggagcgtccacgtctcggcggag
cagcccctcggcgatgacatggggatgctggcgctctatgcggcctattcgcatacctcg
cgtcaatttaccgaggccgtcaatcttccgcagaaccagccgggggcctatctggaagcc
tttggcctgctgaatgtctcgctggactggcgtaacgtggccggttctaagttcgacctt
ggggtcttcgcgaccaatctcgtcaacaagacctatcgtgtttccaactcggacgtctat
cagggaggtggcttgctctactgggcgacgctgtacggagagccccgcatgctcggcgtc
aggctcaaatataccttcggcggaggctaa
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