Novosphingobium sp. P6W: TQ38_027430
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Entry
TQ38_027430 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_027430
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_027430
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MipA
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AXB80314
LinkDB
All DBs
Position
pP6W1:complement(367754..369991)
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AA seq
745 aa
AA seq
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MARVIVAATSLALFAATDPALAQSLSTPEASESGEIVVTARRREEKLQDVPIAVTAVDTV
ALDSRGLDNVTQVGQIAPNIQFTPGQGGNSGGIAPFIRGVGENDFIITSDPAVGVYIDGV
YVARTFGATTELLGVDRIEVLRGPQGTLFGKNTVGGAISIVSSVPGQRRTIQADIRYGSF
NTVRGRVHAETPLSEKWSLGVSALGEFGEGWQKIPSGRNLGNRNVVAGKMALHYDDGTLD
ALLQVDGLRRRQNSAPHSLIAFTPTFLSDLQSTFIAPCCTVPGDIDRTDSTPALNRDDTD
AVNVSLTLSADLGGPTLKSITAYRHVDAVFGRDGDASSAVNYAGDIHDEKARQYSQELQL
AFDLGGRGSLLLGAFAYREKTWDDTRLVVADGLYSRLIAAGFDPGLATTLDLNIDFRNRQ
RTDNLAVFANGNYDLTDSLSLELGARYTWEKKRFTQSAMRVYSSAPLLSGTPQYTLEKSW
DAFTPRASLSYKLRPDVMAYASYSRGFRSGGFNGRPTSLEEIGSYDPEHLTAYEAGIKTS
FGRIGTINLALFRNEYRDQQILVSTVSPASGLLVVRTENAGRSRIQGLELETKVRASSRF
TFTGALGLLDAKYLDYVSVINGVPTDVSDRRPKQAPDITANGSAVYTLPIADQTEGVFRL
DAAYKSEVFVDPENSPLLRQPDHVLLNASAELRLLRSDISIRAGVDNITDRRVITAGYDA
RSSFGFVEAFYSPPRRYTLTLAYRH
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgtgattgttgcagcaacgtccctggcgctcttcgccgcgacggatcccgct
ctagctcagagcttatccaccccggaagccagcgaaagcggcgagattgtggtcacggcc
aggcgccgggaagaaaagctgcaagacgtgccgatcgccgtcaccgctgtcgatacagtc
gcgctggacagccgcggcctcgacaacgtcacgcaggttggccagatcgcgccgaacatt
cagttcacccccggccagggcggcaattccggcggcatcgcgcccttcatccgcggggtg
ggcgagaacgacttcatcatcacctccgatccggcggtgggcgtctatatcgacggggtc
tacgtcgcccgcaccttcggtgcgacgaccgaactactgggcgtggaccgcatcgaagtc
ctgcgcggcccgcagggtacgctgttcggcaagaacacggtgggcggcgcgatcagcatc
gtctcttcggtgccggggcagcgccggacgatccaggccgacattcgctacggctcgttc
aataccgtgcgcggacgtgttcacgccgaaacaccgctgtccgaaaagtggtcgctgggt
gtttccgcgctcggtgaattcggagagggatggcagaaaatcccgtccggacgaaatctc
ggaaaccgcaacgttgtcgccggcaagatggcccttcattacgatgacggaacgctcgat
gccctgttgcaggtggacggattgcggcgccgccagaacagcgcgccgcacagcctgatc
gccttcactccgaccttcctgtcggatctccagtccacattcatcgcgccctgctgcacg
gttcccggcgatatcgaccgtacggacagcaccccggccctcaaccgcgacgataccgac
gccgtcaacgtctcgcttacgctgagcgcggacctcggcggcccgacgctgaagtcaatc
accgcctatcgtcatgtcgatgccgtgttcggccgtgacggagacgcatcgtccgctgtc
aactacgcaggcgacattcacgacgagaaggctcggcaatacagtcaggaactgcagcta
gccttcgatcttggcgggcgcggctcgctgctcctgggcgcattcgcctatcgggagaag
acctgggacgatacccggctggtcgtcgcggacggcctctattcgcgtctcatcgccgcc
ggttttgatccaggtctcgcgaccacgctcgaccttaacatcgatttccgcaaccgtcag
cgcactgacaatctcgcggtgtttgccaacggcaactatgatttgaccgacagcctctcg
ctggaactcggtgcgcgctacacctgggagaagaagcgcttcacccaatcggccatgcga
gtctactctagtgcgcccttgctgtcgggtacaccccagtacaccttggagaagagttgg
gatgcattcacaccgcgcgcttcgctgtcctacaagctgcggcccgacgtcatggcctac
gcttcctactcgcgcggctttcgctccggcggcttcaacggacgtccgacctctctggag
gaaatcggctcttacgatcccgaacatctgactgcctatgaagctggaatcaaaaccagt
ttcggccgtatcggcacaatcaacctcgcgctgttccgaaacgaataccgtgaccagcaa
atcctcgtttcgacggtcagcccggccagcggcctactggtggtgcgcacggaaaatgcc
ggccgttcccggattcagggtctagagctcgagaccaaagtgcgcgcctctagccgcttc
accttcaccggcgcgctcggcctgctcgacgccaagtatttggactatgtgtccgtcatc
aacggcgtaccgacggacgtcagcgaccgccggcccaagcaggcgcctgacatcaccgcg
aacggaagcgcggtctataccctgcctattgccgaccaaaccgagggcgtgttccgtctt
gatgcagcttacaagagcgaggtcttcgtggatcccgaaaactcgccgctgctgcgccag
cccgaccatgttttattgaacgcaagcgcagagctgcgcttgctccgcagcgacatttca
atccgagctggagtggacaatatcaccgaccggcgagtcatcactgcaggctatgacgcc
cgctccagcttcggtttcgtagaggccttctactcacctccccggcgctatacactgacg
cttgcctatcgccattga
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