Novosphingobium sp. P6W: TQ38_028105
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Entry
TQ38_028105 CDS
T05550
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_028105
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_028105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF3724
Motif
Other DBs
NCBI-ProteinID:
AXB80426
LinkDB
All DBs
Position
pP6W1:544429..547458
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AA seq
1009 aa
AA seq
DB search
MINSVHKAALYGATSLTALALLCGQAHAQETANPESSTTAPEDNTIVVTGSITRNPAAAT
ASPVVSINSDDLAKRGITTVADALQTLTANNAGTIPASWSAQGFTTGASAPSLRGFNNAY
TLTLFDGMRTAYYPLADDTQRNIVDINSVSGSIVDRIDTLLDGASATYGSDAIAGVINVL
TKRQITGLHLDGSLGISQRGDAGEQRLNATYGYGDLDEQGFNVYANVEYQHNDSLFLRDR
GAPFNTADQSTICGTAAQGCLTNSVRNGIQADGSYNGFQSTIINYVRPYNADGTAAGNYQ
MLNPSAGCGRLNSVTLTPEQQAVTAGTPSVVCQQDLVNDYSMYNAAITRKGATLRATAKV
GADAEAFFMFNYYNVKTSNTTSNAGWVGQTAAGGQQVSLSQIFLPTYVCGAGTSSIVGGI
LTAKGCNASNGTLNPNNPFAAQGQLARLVGLPDTPRQTFTDAKTYRASAGINGTVGDGWH
YTLGATASEVTLDVKNTGYIYLQGLMDAIAQGTYNFVDPSKNSAAANQIIFPDQVKRSTS
KLAQVIGSVDKDLFELPGGRLNVAVAGQYRYESINNPSSNAPNNEDPYARYYGINAVGVK
GNRDIWSASYEISVPVLEELRFKADGSYDHYSTGQKNFSPKFEAEFKPIEQVKLRGTFSK
GFRAPNLNESFQLPATGYTSAQINCDSQIYKAFCAAHANNPNYYAGTYSPGITSSGNSEL
KPEKSTSYTFGLVLQPTRNVTLTVDYWRTKIRNVITAASATEDLFAQYYGNNGVVNIPGV
TVTPGQADPENPNALPLLGQIISSFKNANSMLGKGIDVSADGQFDLSSSLSLHTKATASY
LVRLEQTNEDGSVWRYDGSLGGCNLTSCSGAPRLRLAWQNTLDFSDRASLTLTANYTSGY
SSTSADAGGTYKDCAASGESGQLITFPGDGTPGSAAPVQCHAKGVFDLDGHGEVKVADKF
KLYFDVLNILDGKAHYDPNAAYGLYKFNPAWSDRLFIGRYMRVGAKVDF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgataaactcagtacataaagctgcgctatatggcgccacgagcctcactgctctggct
ttgctgtgtggccaggcgcacgcccaagaaaccgccaatccggaatcgtccaccactgcg
cctgaagacaatacgattgtcgtcacgggttcgatcacgcgcaacccggccgccgcgacc
gcgtcccctgtcgtttctatcaattcggacgacttggccaaacgcggtatcaccaccgta
gcagatgcactccagacgctgaccgcgaacaacgctggcactattccagccagctggtcc
gcgcaaggtttcaccaccggtgcttcagcgccgtcactgcgcggcttcaacaacgcctat
accctcaccctgtttgatgggatgcgcaccgcttactacccactcgctgatgacacacag
cgaaatatcgtcgatatcaatagcgtttcaggctcaatcgtcgaccggatcgacacattg
ctggacggcgcctcggcgacttatggctcggacgcgatcgccggcgtcatcaacgtgctg
accaagcgccagatcaccggactgcacctcgatggttcactcggcatttcacagcgcggc
gacgctggcgagcagcgcctgaatgccacttacggctacggtgatctcgacgagcaggga
ttcaacgtctacgccaacgtcgagtaccagcataacgactccctgttcctgcgtgaccgg
ggcgcgccgttcaacacagcagatcaaagcaccatctgcggaactgccgcacagggctgc
cttaccaatagcgtacgcaatggcatccaggctgacggcagctacaatggcttccagtcg
acgattatcaactacgtgcgcccttacaatgcggacggcactgccgcgggcaactaccag
atgctcaatccttcggccggatgcggtcgcctgaattcggtcacattgacgcccgagcag
caggctgtcaccgcggggacgccgtcggtcgtctgccagcaggacctggtgaacgactac
agcatgtataacgctgcaataacgcgcaagggcgcgaccctgcgcgcaaccgccaaggtt
ggcgcagacgccgaagcgttcttcatgttcaactactacaatgtgaaaacttcgaacacg
acgagcaacgccggttgggtaggacagaccgccgcaggcggccagcaagtatctctctcg
cagattttcctgcccacctatgtctgcggcgctggcacgtcctcgatcgttggcggcatc
ctgaccgcaaagggctgtaatgcctccaacgggacacttaaccccaacaacccattcgct
gcccaaggccaactcgcgcgcttggtgggcctgcccgatacgccgcgccagacgtttacg
gatgccaagacctatcgcgcgtcggcgggcatcaatggcaccgtcggcgacggttggcat
tacacgctgggcgccacagcctcggaggtcacgctcgacgtcaagaataccggttatatc
taccttcagggcctgatggacgccattgcccagggtacctacaacttcgtcgacccgtcg
aaaaactcggccgccgcgaaccagatcatcttccccgaccaggtgaagcgctcgacgtcc
aagcttgcacaggtgatcggttcggtcgacaaggacctcttcgaactccccggcggccgc
ctcaacgtggctgtcgcgggccagtatcgctacgagtctatcaacaatccaagttccaac
gcgcccaataatgaagacccctacgcacgttattacggcatcaacgccgtcggcgtgaag
ggcaatcgcgacatttggtcggcgtcctacgaaatctcggtcccggttctcgaggagctg
cgcttcaaggccgacggttcatatgatcactactcgaccggccaaaagaacttctcgccc
aagttcgaagccgagttcaagccgatcgagcaagtcaaattgagaggcaccttctcgaag
ggcttccgagcgccgaacctcaatgaatcgttccagttgcccgcgacgggatataccagc
gcacaaatcaattgtgacagtcagatttacaaggcgttctgtgccgcgcacgccaacaat
ccgaactactatgccggcacctactcgcccggaatcacttcctcgggcaattccgaactg
aaacctgaaaaatctacgtcctataccttcggcctcgtattgcagccgacccgtaacgtg
acgctgacggtcgactattggcgtacaaaaatcaggaatgtcatcactgccgcctcggcg
acggaagacctgttcgcgcagtactacggcaacaacggcgtcgtgaatattccgggcgtg
accgttactcccggccaggctgatccggagaaccccaacgcgcttcctttgctgggccag
atcatcagttcgttcaagaatgccaactcgatgcttggcaagggcatcgatgtgtccgca
gatggccagtttgatctttccagttcgctctcactgcataccaaggctacggcctcctac
ctcgttcgcctggagcagaccaacgaggacggttccgtctggcgttatgatggatcgctt
ggcgggtgcaacctgacctcctgttccggagccccgcgtttgcgccttgcttggcaaaat
acgctcgacttcagcgatcgcgccagcctcacgttgactgcaaattacacgagcgggtac
tcaagcacgtctgccgacgctggcggcacctacaaggattgcgcagccagcggcgaaagc
ggccagctgatcacattcccgggtgacggtacgccagggtccgccgcgcccgtgcagtgc
cacgcgaagggcgtgttcgatcttgacggtcatggcgaagtcaaggtagcggacaagttc
aaactgtacttcgacgtactgaacattctcgacgggaaggctcactacgatcctaatgcc
gcctacggattgtacaagttcaaccccgcttggtcggatcgtcttttcatcggacgctat
atgcgcgtcggcgcaaaggttgatttctaa
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