Novosphingobium sp. P6W: TQ38_028930
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Entry
TQ38_028930 CDS
T05550
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
nov
Novosphingobium sp. P6W
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
TQ38_028930
Enzymes [BR:
nov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
TQ38_028930
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Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AXB80611
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Position
pP6W2:complement(6279..7859)
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AA seq
526 aa
AA seq
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MGQKSKWYYVLKDGWLILRKVNLSDWLIIALSALLPGAIACATYYWLHEHAQQRHIDSLA
VRALDRAEFHFKTMDSALHIVAEQNYAPCSEGGILQLRSIVVGNRSVDEIQVYDADRLKC
SSWDRPPVNPTAGDVIVGPPIDNFLTNVRSAIPGSVDMVGLRSGRYAVLTRPDRLLDEIG
DPRLRVTILHGETILAATRLDGDLPGTRNRASGVDTEGMQSLLAVAKGRALTVRITGDRS
AVQVDTTREMIIVVLLGLAGSSLGGLLARRLIARDSSFHGALEAGIRNGEMEVEYQPIIN
LKTGRCAGAEALVRWRQSDGTFVPPDAFLPLAEQHGLLDDLTDLVIEKVVFDLQEMLKNR
RDIYVAINISSSDMESGRFLDVIGTAIAGTEVAVSNIWIEATERSFIDAKKAKRTTERAR
AAGHRVAIDDFGTGYSSLSLLQHLPLTTLKIDRSFVEGIGADSATRSVIPFIVDMAQSIG
LDLVAEGVEAVEQAEYLLSIGVTHAQGWLYSKSLPIENFISYMKYH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaatcgaagtggtactatgtactaaaggatggctggttgatattgagaaaa
gtcaatctcagtgattggctaattattgctttatcggctttgcttcctggcgctattgct
tgtgctacatactactggttgcacgagcatgcacagcagcgacacatcgattccctcgca
gtgcgagcgcttgatcgagccgagtttcatttcaagacaatggacagtgcgttgcatatc
gttgcggaacaaaattacgccccctgttccgaaggcgggatattgcagctaagatcgatt
gtcgtcggcaataggtcggtcgatgaaattcaggtgtacgacgcagatcgacttaagtgc
tctagttgggaccgaccgccggtaaatcccacagcgggtgatgttatcgtcggccctccg
atagacaatttccttaccaatgtccgctccgctattcctggcagcgttgatatggtcggc
ctgcgttcaggccgttacgcggtacttactaggcccgaccgtctcctggatgagataggg
gacccccgcctccgagtgacgatcttgcacggcgaaactattttggcagcaacacgtctc
gacggcgaccttccaggcacgcgaaatcgcgcatcgggcgtcgacaccgagggcatgcaa
agtctgctggccgtcgctaaagggcgggccctcacggttaggatcactggcgaccgctca
gcggtacaagtcgacacaacgcgggagatgatcatcgtcgtcctgctcggtctggccggc
tccagtcttggcggtctcctggcacgcagactaattgcaagagattcctcttttcatggc
gcgcttgaggcggggatacgtaacggcgaaatggaggttgagtatcaaccgatcatcaac
cttaaaacgggccgatgtgccggcgcggaagcccttgtgcggtggcgacaatcggatggc
acgttcgttccacccgatgcttttctcccgctcgctgagcaacatggattgcttgatgac
cttaccgatctcgtgatcgaaaaggtggttttcgatcttcaggaaatgctgaaaaatcgg
cgcgatatttacgtagcgatcaatatatcgtcgtccgacatggaaagcggcaggtttctc
gacgttattggaaccgcaattgccggtaccgaggtggcagtatcgaacatatggatagag
gctacagaacgtagtttcatcgacgctaaaaaggcgaagcgcaccaccgaaagagctcgt
gcggccgggcatcgcgttgcgatagacgattttggcacaggctattcgagcctttcattg
ctacagcacctgcccctcacaacacttaaaattgaccggtcgttcgttgagggaattggc
gccgattcagcgacaagatcggttatccctttcattgtcgatatggctcaatcaatagga
ctcgacctagttgcggaaggtgttgaagccgtagagcaagcggaatatcttctaagcata
ggggttacccatgctcaaggatggctatattctaagtctcttcctatcgaaaattttatt
agttatatgaaatatcattga
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