Novosphingobium sp. BL-52-GroH: ACFFDA_00290
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Entry
ACFFDA_00290 CDS
T11269
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_00290
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_00290
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XKH10392
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Position
2:52943..55150
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AA seq
735 aa
AA seq
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MDDVDIPHHEGEEDMHYREFRSASLLVLALCLPATAVWAQDATPTGAAAAKQAGEAEGDI
IVTAQRRSERLQDVPIAISAVSGESLQARAVSNLQDFTATIPSVNVQQRRASGVITIRGI
GFEIATAGADPGVAVHTDGVYVSRPAAAIANFYDLERVEVARGPQGTLYGRNATGGAVNI
ITHAPGDTLNGYIDASYGNFNALTVEGAVGGPIADGVSARIAFRTDDHDGYGKNLANGRD
VNDLKTRAMRARIRIEPVADLRIDLSADYYHQNDSFFTPHFEGPYVATSVVLGASAPGKQ
DVNLDQDTINKRTFWGASANVEWNLNDRILVRSITGYRSNKYYWYNDGDGTNLYVARVGR
NEDGHSWSQELQLVGTMPRLNWVLGGYYFFEHNFANGFGSIPSINLFNNDQVGILETNSY
AVFGQATYKLTDWIGITAGGRYTEEKKALVYEATGTLPNRVLRDDAVAGPSTAKFHSFTP
KLSIDYKAARDILLYASVQRGFKSGGYAVGAKTPAFRPETIWSYEAGVKATWLDGSLRTN
ISVFHYDYTDLQVGFIQGLVSVVTNAASAKVNGLEAEVTIRPTRRFTIEANGSLLDATYS
DYRTTDPNRRSLGVLDLSGNRLAQAAKHSGFVAAQYEIPAFDGGITLRGEYTFSGPVFFD
AFNQPQFSGRGYDVMNAFVTYRTSDERWSVAGFVRNLADADVAVGGLVGSVLQGAPIQMS
YLPPRTYGLRVGYRF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgtggatataccgcaccatgagggggaggaagacatgcattatcgagaattt
cgcagcgcgtcgctgttggtccttgcgctgtgtctgccagcgacggccgtttgggcgcag
gatgcgacgcccacgggcgctgctgccgcgaagcaggccggtgaggcggagggcgacatc
atcgtgacggcgcaacgccggtcggaacggctgcaggacgtgccaatcgcgatttccgcc
gtttcgggagaaagcctgcaggcgcgggccgtctccaatcttcaggatttcactgcgacc
attcccagtgtgaacgtgcagcaacgccgtgcgtcaggggtcatcaccattcgcggcatc
gggttcgagattgcgaccgccggcgcggatcccggcgtggccgtgcatactgacggtgtc
tacgtgtcccgtcccgccgctgcgatcgcgaatttctatgaccttgagcgggtggaagtg
gcgcgcggaccgcaggggacgctatatggccgcaatgcaaccggaggcgccgtcaatatc
atcacccacgcgccaggcgatacgctgaacggctacatcgacgccagctatggcaatttc
aacgcgctgaccgtcgaaggcgccgtgggcgggccgatcgcggacggagtgtcggcgcgc
atcgctttccgtaccgacgaccatgacggatacgggaagaacctcgccaacggtagggac
gtcaacgacctgaagacccgtgccatgcgcgcgcggatacgcatcgaacccgtggcggat
ttgcgcatcgatttgagcgcggactattatcatcagaacgacagcttctttaccccacat
ttcgagggcccctacgtcgcaacgagcgtcgtgctgggagcgagcgcgcccggcaagcag
gatgtcaatctcgatcaggatacgatcaataaacgcacattctggggcgcttcggccaat
gtcgaatggaatctgaatgaccggattctggtccggtctatcacaggctatcgcagcaac
aaatattactggtataacgacggcgatggcacaaacctctatgtggcgcgtgtcggccgc
aatgaggatgggcatagctggtcacaggaactgcagctggtcggcaccatgccgcggctg
aactgggtattgggcggctattatttcttcgagcataatttcgccaacggtttcggctcg
atcccgtcgatcaacctgttcaacaacgatcaggtcggcattttggaaaccaattcctac
gccgttttcggccaggctacgtacaaactgaccgactggatcggtattacagccggtggc
cgctataccgaagaaaagaaggcgctggtgtacgaggccaccgggacgctgccaaaccgc
gtactgcgtgatgatgcggtggcggggccatcaacagcgaagttccattcgttcacgccc
aagctcagcatcgactacaaagcggcgcgggacatcctcctttatgcgagcgtgcaacgt
ggctttaagagtggcggctacgcagtcggcgcgaaaacccccgcgttccggccggagacg
atctggagctatgaggcgggcgtgaaggcgacctggctggacgggtcgcttcggaccaat
atctccgtcttccattacgattataccgacttgcaggtcggcttcattcaggggctggtg
tcggttgtcaccaatgcggcgagcgcgaaggtgaacgggctggaggcggaggtcacaatc
cgtccgacgcgtcgcttcacgatcgaggcaaacggctcgctgcttgatgcgacctattcg
gactatcgcaccacggatcccaaccggcggtcgctgggcgtgctcgatctatcgggcaac
cggttggcgcaggcggccaagcattcgggattcgtggcggcccaatacgagataccggcg
ttcgacggcggcattaccctgcgcggcgaatataccttctccggcccggtatttttcgat
gcgttcaaccagccgcagttcagcggcagaggctatgacgtgatgaacgcatttgtcaca
taccgcacgtctgacgagagatggagcgtggccggtttcgtgcgtaatctggcggatgct
gacgtcgctgtcggcgggttggtcggcagcgtcctccagggcgcgcccatccagatgagc
tacttgccgccgcgcacctatggattgcgcgtgggttacaggttctga
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