Novosphingobium sp. BL-52-GroH: ACFFDA_02405
Help
Entry
ACFFDA_02405 CDS
T11269
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_02405
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XKH10785
LinkDB
All DBs
Position
2:complement(551390..553810)
Genome browser
AA seq
806 aa
AA seq
DB search
MSTLKLSGCSQSSSMRPSIRAARRGWVFMKAWMTALGGGVSLAALGFPALAQTVGNPPVA
ASAGIEDIIVTARREQESLQTTPVAVTAVGAEFMKQSQVGDIADLQRSAPSLTIATGAPS
ASGFAFVAIRGQGSLSAGVAVDPAVAMYIDGVYIARPSQALVDLQDIARVEVLRGPQGTL
FGRNTTGGAVNIISEDPVGHVEGSVRVELGNYDYRSAGATLNLPIQGDDLALRMTYNYRE
RGGYGQNIAIDRDANDLKSHFLRGKLRWNPAGGPWSVTLAGDYSHQKDAGQLVALGGLNM
TTSAIPAALRTAMAGYLHTKDNWYDTAGTGYADASQKPFNATEAYGGSVTVDGEVGSAKL
KAITAYRYSNATGFIDLDATPIPILATESGYLSRAWSQEFQLSGDLGSRLDWIAGAYYSR
ETGVEYSVSQTFGFAGGPSSVNDADVKNVTAGIFAQANYQIADGLHATAGLRWTWDKRQV
VLHNLRNAAAGPDATLPSGLPNCAVSVDSAGGPCNQTQVARFDYPAWTLGVDYQVAPELF
VYGKTSRASKSGGWNLRLGSIPAFAPETVRDVEVGLKSGLFDNRVRFNVALFHTWLKNTQ
RVAAAFVGGTQTTYLVNAGNAKIYGAEFELTARPWTGMEVRGNLALLHGAYDKGTFTENQ
MAGGVPVVVDRSDEPFLQIPKRQVSIGATQSLGTAAGELSLHADYSYISSQYFFTSTLAA
GASPAAISQTAIGNRLGRIPGYGLLNARVGLAIEGTGLEAAVFARNLAGKKYLTRSFANL
YATPIGVSTDYVGDPMTWGGSLTYRF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacacttaaattgagtggctgtagtcagtcatcgtcgatgcggccatccatacga
gccgcacgcagggggtgggtatttatgaaggcatggatgacggctctgggcggaggtgtt
tctctcgctgcgctgggcttcccggcactggcacaaactgttggcaatccgcctgtcgct
gcaagtgcgggaattgaggatatcatcgtgacggcgcgccgcgagcaggagagcctgcag
accacgccggtcgcggtaacggcggtcggtgctgaatttatgaagcaatcgcaggttggc
gacatagccgatctgcaacgcagcgcgcccagcctgacgatcgccacgggcgctccatcc
gcgtccggcttcgcgttcgtcgccattcgcggccaaggcagcctttccgccggcgtcgcg
gtcgatcctgccgtcgccatgtacatcgacggggtctatatcgcgcgaccttcccaggcg
ctcgtcgatctccaggacatagcccgcgtcgaagtcctgcgcgggccacaaggcacgctc
ttcggccgcaacacgacgggcggagccgtcaacatcatcagcgaggatcctgtaggccac
gtcgagggcagcgtgcgcgtcgagcttgggaattacgactaccgcagcgccggcgccacg
ctcaacctcccgatccagggagacgatctggccttgcggatgacctataattatcgcgaa
cggggtggctacggacagaacatcgcgatcgatcgcgatgccaacgacctgaaaagtcat
ttcctgcgcggcaagctgcgctggaaccccgccggtggaccttggtcggtgaccctggcg
ggcgattatagccatcagaaggacgccgggcagctcgtcgccctcggggggctcaacatg
acgacgagcgccatcccggcggcattgcgaacggcgatggccggatatctgcataccaaa
gacaattggtacgatacggcgggcaccggctatgccgacgcctcccagaagccgttcaat
gctacggaggcctatggcggatcggttaccgtcgatggcgaagtaggttcggcgaagctc
aaggccatcacggcataccgctatagcaacgccaccgggttcatcgatctcgacgccacc
ccgataccgatcctggcaaccgaaagcggctatctgtctcgcgcatggtcgcaggaattt
cagctatccggcgacctcggatcccggctggactggatcgcgggcgcctactattcgcgc
gagacaggcgtcgaatattcggtcagccagactttcggtttcgccggcggcccgtccagc
gtcaacgatgctgacgtgaagaacgtcacggcgggaattttcgcccaggcgaactaccag
atcgccgacggccttcatgcgaccgcgggcctgcgctggacatgggacaaacggcaggtc
gtgctgcacaatctgcgtaacgcggcggcggggccagatgcaaccttgcccagcggcttg
cccaattgcgcggttagcgtggatagcgccggaggcccttgcaaccagacgcaggtcgcc
cggttcgactaccccgcctggacgctgggggtagattatcaggtggcgcccgagctgttc
gtttacggcaagacgagccgcgcctcgaaatcgggcggctggaacctgcgcctcggttcc
attcccgcgttcgcgccggagaccgtccgcgatgtggaagtggggctgaaatccggactg
ttcgacaatcgcgtccgcttcaacgtcgccctgttccacacttggctcaaaaacacgcaa
cgcgtggccgccgccttcgtcgggggcacgcaaacgacatatttggtgaacgccggcaat
gctaagatctacggtgccgaattcgaactgaccgcgcggccgtggaccggaatggaagtg
cgcggcaatctcgcgctgcttcacggcgcctacgacaaaggcacgttcaccgagaaccaa
atggcaggcggcgtgcccgtcgtcgtcgatcgcagcgacgagcccttcctgcaaatcccc
aagcggcaggtctcgatcggcgcgacgcaaagcctgggaaccgccgcaggcgaactgtcg
cttcatgccgattattcgtacatttcgagccagtatttcttcacgtcgacgctcgctgcc
ggcgcctcgcccgctgccatctcgcaaaccgccatcgggaacaggcttggtcggataccc
ggttacggactgctgaatgcacgggtggggctggcaatcgagggtaccggcctggaagcc
gccgtattcgcgcgtaacctggcgggcaagaaatacctgacccgcagctttgcgaatctt
tacgccacgccgatcggcgtttcgacggactatgtcggcgatcccatgacctggggcggc
agtctgacctatcgcttttga
DBGET
integrated database retrieval system
