Novosphingobium sp. BL-52-GroH: ACFFDA_04105
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Entry
ACFFDA_04105 CDS
T11269
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_04105
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_04105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XKH09660
LinkDB
All DBs
Position
2:complement(945355..947484)
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AA seq
709 aa
AA seq
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MLLKRLWLTTSAFSFAAILAQPAVAQDVADTAAAPAQEGLGEIVVTAQKRLSNAQSTPIA
MTVASGEELSKAGVADVNALSNIAPSVNIAQNNANTMITIRGVSSRDYSETGDPAVAVSV
DNFYLQRAFALNAAMFDVERIEVLRGPQGTLYGRNATAGAVNISSVKPTDDWKLDAAAEI
GNYGTLNLDVGATIPVSDTLSFRVAATRKTHEGYRNNPGLKDGDDANVTGGRVHALWTPT
DRLSVLVTGEMTRVDGVGSVIKGVPYSDVRDDGSLDIGSAKNFALNNQGYTDIRTKAVRT
AISYDMDFATLSFFGGFQKSTLHRDNDQDGGLDYSYGFQQNEDVKDQNYELRLSSNNKTG
FTWQLGGYFFKETDALNTFFQVHGDAGTTPFNFYTFDYDVGSKSKAAFAQVGYDLTDQLK
VEAGVRYTKDNKYQVGYNIIAGAYADLDNHYSGDQITWHAGLNYQATGSSLLYAKVDKGY
KAGGYTTNSSFGPETIVAYEIGAKNRFLGNALQVNLSGFYYDYSDLQTQQEDPATALVYT
LNAGKARVWGAELETVWLVTPDTRIDANVAWLDAKYSDFCTVTAATCPAASDLAGNRLTQ
APEWTLSGGIQHDFHLLGGTLTPRVQTRYQSKSYFTFYNTAAEQQPGYWKSDAQITYAPD
DGPFSITAYVRNIEDKTILTANSNAGYAGAYLVQFAAPRTYGARLSYSF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcaagcgtctttggctcaccaccagcgcgttctcgttcgctgccattctcgct
cagcccgccgtcgcgcaggatgttgccgatacggctgctgctccagcccaggaaggcctc
ggcgaaatcgtcgtgacggcgcaaaagcgcctgtccaacgcgcaaagcaccccgatcgcc
atgaccgtcgccagcggcgaggaactgagcaaggccggtgttgccgacgtcaacgcgctg
tccaacatcgcgcccagcgtcaacatcgcgcagaacaatgccaataccatgattaccatt
cgcggcgtgtccagccgcgattattctgaaacgggtgatccggcggttgccgtcagcgtc
gacaatttctacctgcagcgcgccttcgcgctcaacgcggcgatgttcgacgtcgagcgc
atcgaagtgctgcgtggtccgcagggtacgctctacggccgcaatgccaccgccggcgcg
gtgaacatctcctcggtcaagccgaccgacgactggaagctcgatgccgcggccgagatc
ggcaactacggcacgctcaacctcgatgtcggcgctaccattccggtcagcgacacgctg
tccttccgcgtcgccgccacgcgcaagacccacgaaggctaccgcaacaaccccggcctc
aaggatggcgacgacgccaatgtcactggcgggcgcgtccatgcgctgtggaccccgacc
gaccgcctgtcggtgctcgttaccggcgagatgacccgcgtcgacggcgtcggctcggtc
atcaagggcgtcccctattccgacgtgcgcgacgacggttcgctcgacatcggttcggcc
aagaacttcgcgttgaacaaccagggctacaccgacatccgcaccaaggcggtgcgcacc
gcgatctcctacgacatggatttcgcgacgttgagcttcttcggcgggttccagaagtcc
accctgcatcgtgacaacgaccaggacggcggcctcgactacagctacggcttccagcag
aatgaggacgtcaaggaccagaactacgaactgcgcctcagctcgaacaacaagaccggc
ttcacctggcagttgggcggatacttcttcaaggagaccgacgcgctcaacaccttcttc
caggtgcatggcgatgccggcacgacgccgttcaacttctacaccttcgactacgacgtc
ggcagcaagtccaaggccgccttcgcccaggtcggctatgacctgaccgaccaactcaag
gtcgaggcaggcgtgcgctacaccaaggacaacaagtaccaggtcggctacaacatcatc
gccggcgcctatgccgacctcgacaaccactactcgggcgaccagatcacctggcacgcg
ggcctcaactaccaggcaaccggcagcagcctgctgtacgccaaggtcgacaagggctac
aaggcgggcggctacaccaccaacagctcgttcggtccggaaacgatcgtcgcctatgaa
atcggcgcgaagaaccgcttcctcggcaatgccctgcaggtcaacctctcgggcttctac
tacgactactcggacttgcagacccagcaggaagacccggccaccgcgctggtctacacc
ctcaacgcgggcaaggcgcgcgtctggggcgccgagttggagacggtgtggctggtcact
cccgacacccgcatcgacgccaacgtcgcctggctcgacgcgaagtattcggacttctgc
accgtcaccgccgccacttgcccggctgcgtcggaccttgcgggcaatcgactgacacag
gcccccgaatggacgctctcgggtggaattcagcacgacttccacctgctgggcggcacc
ctgaccccgcgcgtgcagacccggtaccagtcgaagagctacttcaccttctacaatacg
gcggccgagcagcagcccggctactggaagagcgacgcgcagatcacttacgcgccggac
gacggcccgttctcgatcaccgcatacgtgcgcaacatcgaggacaagacgatcctcacc
gcgaacagcaatgccggatacgctggcgcgtacctggtgcagttcgcggcaccgcggact
tacggcgcgcggctctcctactcgttctga
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