Novosphingobium sp. BL-52-GroH: ACFFDA_04475
Help
Entry
ACFFDA_04475 CDS
T11269
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03030
DNA replication
novb03430
Mismatch repair
novb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFFDA_04475
03430 Mismatch repair
ACFFDA_04475
03440 Homologous recombination
ACFFDA_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novb03032
]
ACFFDA_04475
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_04475
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFFDA_04475
DNA replication proteins [BR:
novb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFFDA_04475
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFFDA_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XKH09730
LinkDB
All DBs
Position
2:1039293..1040180
Genome browser
AA seq
295 aa
AA seq
DB search
MSFFDQIESGVAARTPPAEEQPDFVVVDVETACARVSSICQIGIVGFRDGREILAYETLV
DPRDEFSPFNVGIHGITAGHVEGGPTFSDIHATVAGHITGRLTVAHSGFDKGALAAACRI
GDLAMIETTWLDSVRVAKRAWPELSSHRLNVLSRFLGIEHRHHDALSDARAAGMVIVKAI
EHTGIDLQGWLAKPAKFQVSAPKPAAQGPLKGERIAILGEARDGVLAQFIAQAGGRIATT
VGPRTTMLVISAKQPFGRWVTADALHRKAEALRDAGRPIAILTEQALRDRLGAMV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcgaccagatcgagagcggcgtcgccgcaaggacgccgcctgctgaggaa
caacccgatttcgtcgtcgtggacgtcgagaccgcctgcgcccgcgtcagcagcatctgc
cagatcggtatcgtcggcttccgggacgggcgcgagatcctagcctatgagacgctggtc
gatccgcgcgacgaattttcaccgttcaacgtgggtatccacggcatcacggccgggcat
gtcgagggcggtcccacgttcagcgacatccatgcgaccgtcgccggccacatcacgggg
cggctgaccgtcgcccattccggtttcgacaaaggggcgctcgcggcggcatgccggatc
ggcgacctcgccatgatcgagacgacgtggctggacagtgtgcgggtagccaagcgagcc
tggcccgagctttcgagccatcgcctgaacgtgctgtcgcgctttctcgggatcgaacac
cgccaccacgacgccctgagcgatgcgcgggcggccggcatggtgatcgtgaaggcgatc
gaacataccggtatcgacttgcaggggtggctggcaaagccggcaaagttccaggtctcg
gcacccaagcccgctgcccagggcccactcaaaggggagcgcatcgcgatcctgggcgag
gcgcgcgacggcgtgctggcgcagttcatcgcccaggccggcggacggatcgccaccacg
gtcggccccaggacgaccatgctggtcatcagcgcgaagcagcccttcggtcgctgggtg
accgccgatgccctgcatcgcaaggcggaggcattgcgcgatgccggccggccaatcgcg
attctgaccgagcaagcgctccgcgaccggcttggggcgatggtgtaa
DBGET
integrated database retrieval system
