Novosphingobium sp. BL-52-GroH: ACFFDA_05430
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Entry
ACFFDA_05430 CDS
T11269
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
novb03000
]
ACFFDA_05430
Transcription factors [BR:
novb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ACFFDA_05430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
MarR_2
IclR_C
MarR
TrmB
Dimerisation
GAF_2
GAF
Rrf2
HTH_27
Fe_dep_repress
DNA_binding_1
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
XKH09906
LinkDB
All DBs
Position
2:1254627..1255433
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AA seq
268 aa
AA seq
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MEKGVPIRSLARGLAVLQAINRGGTISMMEIARTSNVPYPTAVRLVQTLVHEGLVEREPS
RKNYRPTALVQTLAHGFQGHAELVGHSRPHIVALTRQLGWPISLASHVGHSMIIRDSTHS
LTTLTFNAYYPGYGVPILECAAGLAYLSFLPEDERQGLLDALRLMPDQVTNHTIDLFEKE
ALAAKIIEQGYATRVYNTFTRNPGKTSSIAVPIIVDGHVAGTLTLAFFAAAVEMADALKQ
CLEPLKAAALAIGEDMSGSQGPAPASSE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcgtaccgatacggtcgctcgcgcgaggtcttgccgtgttgcaagccatc
aaccggggcggcaccatttcgatgatggagattgcgcgcacctccaacgtcccttacccg
acggccgtccgcctggtccagacgctcgttcacgaagggctggtggagcgcgagccttcg
cgcaagaattaccggccgacggccctggtccaaacgctggcgcacggctttcaaggccac
gcggaactcgtcgggcattcgcggccccatatcgtggcgctgacccgtcagctcggctgg
ccgatttcgctcgccagccatgtcggccattcgatgattatccgcgactccacccattcg
ctgacgacgctgacgttcaatgcctattatcccggctacggggtgccgatcctcgaatgc
gccgccggcctcgcttacctgtcgttccttccggaagacgaacggcagggcctgctcgac
gcattgcggctgatgcccgaccaggtgaccaaccacaccatcgacttgttcgagaaggaa
gcgttggcggccaagatcatcgagcagggctatgccacgcgcgtctacaacaccttcacc
cgcaatcccggaaagacctcgtcgatcgcggtgccgatcatcgtcgacggccatgtcgcg
ggaaccctgacgctcgctttcttcgccgccgcggttgaaatggcggacgcgctcaagcag
tgcctcgaaccgctaaaggccgctgccctcgcgatcggcgaggacatgagcgggtcgcaa
gggccggcgccggcatcgtcggagtga
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