Novosphingobium sp. BL-52-GroH: ACFFDA_06085
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Entry
ACFFDA_06085 CDS
T11269
Symbol
dmpG
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00360
Phenylalanine metabolism
novb00362
Benzoate degradation
novb00621
Dioxin degradation
novb00622
Xylene degradation
novb01100
Metabolic pathways
novb01120
Microbial metabolism in diverse environments
novb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
ACFFDA_06085 (dmpG)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ACFFDA_06085 (dmpG)
00622 Xylene degradation
ACFFDA_06085 (dmpG)
00621 Dioxin degradation
ACFFDA_06085 (dmpG)
Enzymes [BR:
novb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
ACFFDA_06085 (dmpG)
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
PALP
DUF3866
Motif
Other DBs
NCBI-ProteinID:
XKH10034
LinkDB
All DBs
Position
2:complement(1398475..1399509)
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AA seq
344 aa
AA seq
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MNIDPAIDKLYIQDVTLRDGMHAIRHRYGIAEVQAIAGALDRARVDAIEVAHGDGLSGSS
FNYGFGAHTDWEWIEAVAEVLDHAVLTTLLLPGIGTLHDLKLAYQLGVRSVRIATHCTEA
DVSRQHIEAARSLGMDVSGFLMMSHMADPASLAEQARLMESYGAHCVYVTDSGGAMNMEE
YAARLQAYDRVLKPETQRGVHAHHNLSLGVANSIVAVQNGALRVDASLAGMGAGAGNAPL
EVFVAAADRYGWNHGCDLYALMDAAEDLVRPLQDRPVRVDRETLTLGYAGVYSSFLRHAE
KASADHGVDTRAILVEAGRRKMVGGQEDMIVDIALDLARDGARR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgatcccgccatcgacaagctctacatccaggacgttaccctgcgcgacggc
atgcatgcgatccgtcaccggtacggcatcgccgaggtgcaggcgatcgccggcgcactc
gaccgcgcccgcgtcgatgcgatcgaagtggcgcatggcgacggtctcagcgggtcctcg
ttcaactacggcttcggggcgcataccgactgggaatggatcgaggccgtggccgaggtc
ctcgaccatgccgtgctgaccaccttgctgctgcccggtatcggcactctccacgatctt
aaactggcataccaactcggcgtccgctcggttcggatcgcgacgcattgcaccgaggcc
gacgtgtcgcgccagcacatcgaggccgcccgcagcctgggcatggacgtgtccggcttc
ctgatgatgagccacatggccgatcccgcctcgctggccgagcaggcacggctgatggaa
agctacggcgcgcattgcgtctacgtcaccgacagcggcggagcgatgaacatggaggaa
tacgctgcccggctccaggcctacgaccgcgtcctgaaaccggaaacccagcgcggtgtc
catgcccaccacaacctttcgttgggcgtcgccaattccatcgtcgcggtccagaatggt
gcgctgcgcgtggatgcttccctcgccgggatgggcgccggggccggcaatgccccgcta
gaggtcttcgtcgctgctgcggatcgctacggatggaaccacggctgcgacctctacgcg
ttgatggacgcggccgaggatctggtccgccccctgcaggaccgccccgtgcgcgtggac
cgcgagacgctgacgctgggctatgccggggtctattccagcttcctgcgacacgccgaa
aaggcgagcgcggaccacggggtagatacccgggcgattctcgtcgaagccggccgccgc
aagatggtcggcggccaggaagacatgatcgtcgacatcgctctcgacctcgcccgtgac
ggagcccggcgctga
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