Novosphingobium sp. BL-52-GroH: ACFFDA_07305
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Entry
ACFFDA_07305 CDS
T11269
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFFDA_07305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
bMG3
BapA_N
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
XKH10269
LinkDB
All DBs
Position
2:complement(1690632..1697099)
Genome browser
AA seq
2155 aa
AA seq
DB search
MPVEAKISPTTSGINTATVQAVEGSVSVPAGSSVALNVAPAAVAGYTRDGTDLLVHLKSG
EVIRVANFYLDPTKVSHLLLVQNEELVAADIGQATGSALSSATYVPIDAAAGFQASAAVE
AAGAAAGAGGAGLGAGALIPLGVLGVGGLAVAAAGGGGGNDEPVTPPDTTAPAAATGLAI
NTAGTSLTGSAEAGATVNVDLDGNGTTDISATVGANGTFAVALSPPLLDGETVSVMVRDA
AGNTSPAATVTAPDTTAPAAAQGVAIAADGASITGTGEPGATAQIDVDGDGAPDYSATIA
ANGTFTIALAPALDNGQQISVTLVDGAGNISAAVLATAPDLSPLPTTAPVIDPTDGTFLA
GTATSGTAVLLTDAAGATIGQAAIAADGIWSFIPSTPLADGTIVTATAVNRIGEAGPGAT
AIVDALAPPAPVIAPSNGGSVTGSAEAGAIVLISNEQGTPIGQATVDAGGAWTFTPVTPF
TDGTVVIAVARDAAGNTSPTSSITVDAVAPATPAVTPPNGVSVSGTAEPGSTVLLIDAGG
DPIGQVIADTGGTWTFAPTSPFADGAVLTVVARDAAGNASAPASATVDAAPPEAPTIAPT
SGEILFGTAEPGSLVTLSDGDGNPIAQVSVDAAGDWTFTPASPLGDGTVVEAAATDAVGN
TSAIASTTVDATPPAAPEIYPTDGSVISGTAEPGVLVSVFVESGDPIGEATADADGHWTF
TLDVSLPHGAVIHAHAQDPAGNQGPQASATVDSIAPDAPTVEATNGSLLAGTAEPGTTVM
LTDSDGTAIGETIVDDNGDWTFLPNPSLVDGTVVSVVAQDAAGNASMVVDVTVDAAAPAA
PTIDPSNGAVLSGSAEDGSIVTLTDGDGDPIGQVTAYGSGNWSFTPGSPLPDGTVVNAVA
TDAVGNTSPPSSTTVDFTPPAAPAIDPTDGSTITGTSEPGALVTLTDDDGDPIGQVRADS
DGAWIFTPGVPLPDGTIVNAFAQDAAGNVGPEASVTTDAIAPPAPTIDPTNGTVIAGTAE
AGSTILLTDENGDPIGETLTNQDGDWTFTTGSPLPDGTVVNAVARDAAGNTSLEASTTVD
AAPPAPPSIDPGNGAFLIGQAEIGVVITLADGSGALIGQTSTDGSGNWAFAPSVPLPDGT
VVVAVASDTAGNASTPTSTTVDAVSPPAPTIDATNGSVLSGTAEADATVTLTDGSGNSIG
QTVADGDGAWSFVPDSPLPDGTVVNAAATDAAGNTGPQASTTVDAVAPAAPVIDPSDGST
VTGLSEAGTLLVLTDADGNPLGQVTADIDGAWSFTPASPLPEGFVVNAIAQDAAGNTSPQ
SSTTVDTTPPAEPTIDPTNGSQVTGTAEPNSTVILMDGTGNASARVIIPQLGLPLGQVFA
DEGGNWIFTPLLPLPDGTVVIAISVDAAGNVSSAVNTTVDGEAPLTPTIDPTSGLALAGT
AEAGVTVLLTDALGDPIGQATADEDGNWTFAPLVALVNGTVVDAVAVDEAGNESPPATIT
VDSIIPAVPLVNASNGTIITGTAEPDSTVVLTDGFGNPIGTATVDGNGDWSFTPEASLLN
ATVVIAVAQDATGNTSGPTAIVVDALAPASPFLSLLSNGSLLSGTAEPNSRIEIVIDGDT
ANPIVVNVDGSGNFSFPLSAPIVLGETISAVAVDAAGNTSLPTLLVAPDIAPPTLSVPEA
ADGFVNATEIDNGIQVEVAVRPTMQVGQVVTAQFNGQGNYQVQATHTLTTGDILVGAVIL
SIVPTGGLGALPDGASTIVASVGGGAVSSPVAFTIDTTPPPAPIVALTSSVLTISADPGT
DLTVNADVGGTSANTVVTADENGLASVNLLTGLNVGLGWNDLLTAEVTVTGKDKAGNPGN
VATIDVDSSIQRPVTIGNLALDVSLNPLNPRFGFSGTTEPDSTVVIRVVTPVLNVELLPV
QADSSGHFDLNLLSPTILTQLGLNITDILNLGAQISFGVVSTDPQGNESSAYVVDLGPNG
LSLNIGQVDVNGTVGDDVMSGSVGTEHINSGSGNDLIFDVGAGDHVAAGPGHDTVQLTAT
NFSNADGGTGFDTVLLANGIDLDYGVGVGTFTGIERFDLGSGDSGSVLTLTASEVTAITS
GNNTLQITGESNDALHVTGAVDTGTTQQVEGVVYHVYSFGVNTLLVEDNTIQVVV
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgaggccaagatttcgccaacaaccagcggcatcaacaccgcgaccgtccag
gcggtcgaagggtcggtttcagtccctgcgggcagcagcgtggccctgaatgtcgccccc
gctgcggttgcgggctacacccgcgatggcacggacctgctggtccatctcaagtcgggc
gaagtgatacgagtcgccaacttctacctcgaccccacgaaagtctcgcacctgctgctc
gtccagaacgaggaactggtcgccgccgacatcggccaggccacgggcagcgccttgtcg
agcgctacgtacgtgccgatagatgcagccgccggcttccaggcctctgctgcagtcgag
gcggccggcgcggctgccggagcgggtggagcaggcctcggcgcgggcgcgctcatcccg
ctcggcgtactcggcgtgggcggcctggccgtggcggccgcgggtgggggaggaggcaac
gacgaaccggtcaccccacccgacacgaccgcccccgccgccgcgacggggcttgccatc
aatacggcgggtaccagcctgaccggcagcgcggaagccggcgcgaccgtcaacgtggac
ctcgacggcaacggcacgaccgacatatcggctaccgtcggcgccaacggtacgtttgcc
gtcgcactctcgccaccgctgctcgacggcgagacggtcagcgtcatggtgcgcgatgcg
gccggcaacaccagtcctgcggccaccgtcaccgcgcccgacaccaccgctcctgccgct
gcccagggcgttgccatcgccgccgacggggcgagcatcaccggcaccggcgagcccggc
gcaacagcgcaaatcgacgtggatggggatggtgccccggattacagcgccacgatcgcg
gccaacggcactttcacgatcgccctcgcccccgccctcgacaacggccagcagatcagc
gtgaccttggtcgacggtgccggcaatattagcgctgccgtgctggcgacggcgcccgac
ctgtccccgctgccgaccaccgcgcctgtgatcgatccaaccgatggaaccttcctcgcg
ggcacggcgacgagcggaaccgcggtgctgctcaccgacgcggcgggagccacgatcggc
caagcggcgatcgccgccgacggcatctggtctttcattccgtcaacgccgcttgccgac
ggcaccatcgtcactgcgaccgcggtcaaccggatcggcgaggccgggcccggggcgacc
gccatcgtcgacgcgcttgccccgcccgcgccggtcatcgccccgtcgaacggcggctcg
gtcacagggtctgcggaagccggtgcgatcgtgctgatctccaacgaacagggcactccc
atcggccaggccaccgtcgatgccggcggcgcctggaccttcacacccgtaacgccattc
accgacggcactgtggtgatcgctgtggcgcgcgatgcggcggggaacaccagcccgacc
tccagtatcacggtggacgcagtcgcgcccgccacgccggccgtcacgccgcctaacgga
gtgtccgtgtcaggcactgcggagcccggctcgaccgttttgctcatcgatgcggggggc
gatcccatcggccaagtgatcgccgataccggaggcacctggacattcgcgccgacctcg
ccctttgccgacggcgccgtgctgaccgtcgtcgcccgcgatgctgccgggaacgccagc
gcgccggcaagcgcaacggtggacgccgccccacctgaagccccgacgatcgcgccgacc
agcggcgagatcctgttcgggacagccgaacccggatcattggtcaccctgagcgatggc
gacggcaatcccatcgcccaggttagcgtcgatgcagcaggtgactggaccttcacgcct
gcctcaccgctgggcgacggcaccgtcgtcgaagcggccgcgacagacgccgtcgggaac
acgagcgcgatcgccagcaccacagtcgatgcgaccccgcccgccgccccagagatctac
ccgaccgacggatcggtgatttccggcaccgcagagccgggcgttctggtctccgtattc
gtcgaaagcggcgaccccataggcgaggccacggccgatgccgatggccattggaccttc
acgctcgacgtgtccctgcctcatggtgcagtgatccacgcccacgcacaggaccccgct
ggcaaccagggcccccaggccagcgcgacggtcgattcgatcgcgcccgatgctcccacg
gtggaagcaacgaacggttcactcctcgccgggacagccgaacccggcacgacggtcatg
ctgacggatagcgacggcaccgccatcggcgaaaccattgtcgatgacaacggcgactgg
accttcctcccgaacccttcgctggtcgatggaacggtggtctccgtagttgcacaggac
gccgccggcaacgccagcatggtggtagacgtgacggtcgacgccgcagcgccggccgct
ccaaccatcgatccctccaacggcgcggtgctgtccggcagtgcagaggacggatcgatc
gtcaccctgacggacggcgacggcgatccgatcggccaggtcactgcctacggcagcggc
aactggagctttacgcccggatcgcccttgcccgacggcaccgtggtcaacgcggtggcg
accgatgcggtcggcaacaccagcccgccatcctccaccaccgtcgacttcaccccgcct
gccgcccccgcgatcgaccctaccgacggttccaccatcacgggtacctcggagccgggc
gctctcgtaaccctgacggacgacgatggtgatcccatcggccaagtcagagccgatagc
gatggcgcctggatcttcacgccgggcgtcccgctgccagacggcaccatagtcaatgcc
ttcgcacaggacgccgccgggaatgtcggtccggaagccagcgtgacgacggacgccatc
gctccacccgcgcccaccatcgatccgaccaacggcacggtaatcgccggcacggccgag
gcgggatcgacgatcctgctcaccgacgaaaacggcgaccccatcggtgagaccctgaca
aaccaggacggcgactggacatttaccaccggctcgccactgccggacggcacggtcgtg
aacgccgtagcccgtgatgctgccggcaacaccagcctcgaggccagcacgaccgtcgat
gccgccccgccagcgcctccctcgatcgaccccggcaacggggcattcctcatcggtcag
gcggagatcggcgtggtcatcacgctggcggacggcagcggcgccctcatcggccagact
tcgaccgatggcagcggcaactgggccttcgcgcctagtgtccccctccccgacggcacg
gtggtcgtcgccgtcgccagcgacaccgccggtaacgccagtacgcctaccagcaccacg
gtcgacgcggtctcaccccctgcccctacgatcgacgccaccaacggttcggtgctgtcc
ggcacggcagaggccgacgccacggtcacgctgaccgacggcagcggcaattccatcggc
cagaccgttgccgatggcgacggtgcctggagcttcgttcccgactcgcctttgcccgac
ggcaccgtagtgaacgccgcagcgaccgatgctgccggcaataccggtccccaggccagt
actaccgtggacgccgtagcgccggccgcgccggtgatagaccccagcgacggcagcaca
gtaaccggcctgtccgaggccgggacgcttctcgtgctgaccgacgctgacggcaatccg
ctgggccaggtgacggcggatatcgacggcgcctggtcgttcacaccggcatcgccatta
cccgagggcttcgtggtaaatgcgatcgcacaggacgcggcaggcaatacaagcccccag
tccagcactacggtcgacaccacgccgcctgccgagccgacgatcgacccgaccaacggc
tcgcaagtcaccggcacggccgagccgaactcgacggtgatcctgatggacggcaccggc
aacgcctccgcccgcgtgatcattccccaactcggcctgccgctgggccaggtctttgcg
gacgaagggggaaactggatattcactccccttttgccgttgcccgacggcaccgttgtg
atcgcaatctcggtcgacgcggccggcaatgtgagcagcgcggtgaacacgacggtcgac
ggtgaggcgcccctgaccccgaccatcgatcccacttcgggcctggcgctggcgggaacc
gcggaagccggtgtgactgtcctgctgaccgacgcactgggagatcccatcggtcaggcc
acggcagacgaagacggaaattggaccttcgccccgctcgttgccctggtcaacggcacg
gttgtggatgcagtggcagtggatgaagccgggaacgagagccccccggccaccatcacc
gtcgattcgatcattccagccgttccgctggtgaacgccagcaacggaacgatcatcacc
ggcaccgcagaaccggattcgaccgtcgtcctgactgatggcttcggtaacccgatcggc
acggccactgtcgacggcaacggcgactggagcttcactcccgaggcatcgctgctcaat
gccaccgtcgtgatcgcggtggcgcaggacgccacgggcaacaccagcggaccgacggcg
atcgtcgtcgatgccctcgccccggcaagcccgttcctgtcactgctgtccaacggcagc
ctgctcagcggtacggcagagcccaacagccggatcgagatcgtcatcgatggcgacacc
gccaacccaatcgtcgtcaacgtcgatggcagcggcaatttcagcttcccgctgtctgcg
ccgatcgtgcttggcgagaccataagcgccgttgcggtcgatgcggcgggcaacacaagc
ctgccgaccctcctggtcgcaccagacatcgcaccgccaacgctctcggtgccggaggcc
gcggacggcttcgtaaacgcaacggagattgacaacggcatccaggtcgaagttgcagta
cggccgacgatgcaggttggacaggtcgtcacagcccagttcaacggacaggggaactat
caggtccaggccacgcacacgctgaccaccggcgacattctggtgggcgcggtgattctc
agtatcgtgccaaccggagggcttggcgcactgccggacggcgcctcgacgattgtggcc
agcgtgggcgggggcgcggtttcgtcgcccgtcgccttcacgatcgacaccacgcccccg
ccggcgccgatcgtagccctgaccagcagcgtgctgacgatctcggccgatcccggcacc
gacctcacggtcaatgccgatgtaggcgggaccagcgcgaatacggtggttacggccgac
gagaacgggttggcttcggtaaacctgctcaccggcctgaatgtcggcctcggatggaac
gacctgctgaccgccgaagtcaccgtcaccggcaaggacaaggccggcaatcccggcaat
gtcgccacgattgacgtcgattccagcatccagcggccggtgacgatcggcaacctagcc
ctcgacgtcagcctcaacccgctcaacccgcggttcgggttcagtggcaccacggaaccc
gattctacggtcgtcatccgcgtggtcacgccggtgttgaatgtcgagctgctacctgtc
caggccgacagttccggccatttcgaccttaacctgctcagccccacaatcctgacccag
ctcggcctgaacatcaccgatatcctcaacctgggagcgcagatttccttcggcgtcgtt
tccaccgatccccaaggcaacgagagttcggcctacgtcgtcgatctgggcccgaacgga
ttgtcgctgaatatcgggcaagtcgatgtcaacggcaccgtgggtgacgacgtgatgtcg
gggtcggtcggcaccgagcacatcaacagcggtagtggcaacgacctgatcttcgacgtc
ggagccggcgaccacgtcgctgccggccccggccacgacacggtgcagctgaccgcgacc
aacttctcgaacgcggatggcggaaccggcttcgacaccgtccttctcgccaacgggatc
gacctcgactacggcgtcggggtcggcaccttcaccgggatcgagaggttcgacctcggc
agtggcgacagcggcagtgtcctgacgctaaccgcgagtgaagtgaccgcgatcacgagt
ggcaacaacaccctgcagatcaccggcgagagcaacgatgcccttcacgtcaccggcgcg
gtcgacaccggcacgacgcaacaagtcgaaggcgtcgtctaccacgtctatagtttcggg
gtgaacacgcttctggtcgaggacaacacaattcaggtcgtggtgtga
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