Novosphingobium sp. BL-52-GroH: ACFFDA_07880
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Entry
ACFFDA_07880 CDS
T11269
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
novb Novosphingobium sp. BL-52-GroH
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
nSTAND3
NAT10_TcmA_helicase
NPHP3_N
SLFN-g3_helicase
ResIII
UvrD-helicase
CbiA
RuvB_N
MipZ
AAA_5
Motif
Other DBs
NCBI-ProteinID:
XKH11360
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All DBs
Position
unnamed2:55444..58833
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AA seq
1129 aa
AA seq
DB search
MRTYEDQLLHSPSDLVTFLGCAHAVSLNHLRLVDPGALPERAQDDAMAKLVQRAGLDHED
AYRAGLKAEGGLVEIPTTGSLRHRAAATLEAMRAGAKTIFQAAFLDAPWHGFADFLIRVE
EPSDLGAWSYEPVDTKLAKSVKASYIVQLGLYAEMIARVQGIAPRRVHVALGSGRLETFR
LAEFAHTLGAAKARYLDFIRDGAPQSAPEPCAACSLCGWRDHCDEQLDAADHLSRVAGLG
KPQRRKLEDAGITTLAALAGVGEDTKVPRMAAATFAKLRAQAALQLARREGGAPVVVPLP
IEPGRGFATLPPPHPADLFFDLEGDPLTEGGLDYLWGVHHVVDGHPEFRFRWGHDRAAER
VAFESTVDWIVAHLAANPGAHVYHYAPYEVTALRRLSTLHASREDAIDTLLRERKLVDLY
GVLRQSIRTSEPNLSLKTMEVFFARKRDQAVTNAGDSIVEYKSWQDSGEQKILDDILEYN
KVDCENTEALRDWLVSLRMDGLPWREVGLATALPDDKAEARAEAEAAASALSAAIAAGPL
PPSAEGRALVDHLTQFHRRADKPALWAMFDRCERELEEMVEDGECIGDIAPLPDAEGAWQ
WQEKRSTLARYRFAPQDTKLRKGSAVLHAPTLAKLGKIDSIDATAGQLTLKRQLKPGEAF
PESGSLIPEPAVNNRPLIAAVRRVAAHWAAGGESYRALLDLIERTPPRLHDWPTAGQAGQ
AGALVQPSENLVEAATLRCLAMDDSALFIQGPPGTGKTFTSAHVIVALMAAGKKVGVSSN
SHKAVNNLLTKVEEIAIEQGVSFVGVKKASKTDPGSYLGGVIITDVESNGDAWDYHPDLI
GGTAWLFADETADQSLDYLFVDEAGQVSLGHLLAMGAAARNIVLVGDQMQLAQPIQGSHP
GESGLSALDYLLQGEATVAPDRGILLDTSWRMHPDICGFISDAVYDGRLQAHPDCARQTL
HLPEIHDPALANHGIRFVPMDHAGRGQRSDEEVARVVDLCGQLIGTPFTDRAGQTDKLSW
NNILIVAPYNMQVIALAEALPAAARVGTVDKFQGQEAEVVIVSLATSSPDDLPRHVDFFY
SKNRLNVAISRARTLAVVLANPKLLELDAKSVEHLRLVNTLAWIAGEGK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcacctacgaagaccagctgctccattcgccgtccgatctggtgacgttcctcggc
tgcgcgcatgcggtgtcgttgaatcacttgcgcctcgtcgatcccggtgcgctgcccgag
cgcgcgcaggacgatgcgatggcgaagctggtccagcgcgccggactcgaccacgaggat
gcctatcgcgcggggctcaaggccgagggcgggctagtggagattcccaccacgggctcg
ttgcgccaccgcgcggctgcgacgctggaggcgatgcgcgctggtgcgaagacgatcttt
caagccgcatttctcgatgcgccctggcacggcttcgcggacttcctgatccgggtggag
gagccttcggacctcggcgcatggtcctacgagccagtcgataccaagctcgcgaagtcg
gtgaaggcatcgtacatcgtccagcttgggctttatgccgaaatgatcgcgcgggtgcag
ggtatcgcgccgcgccgggtccacgtggcgctgggcagcggcagactggaaacgttccgc
ctggccgaattcgcgcatacgctgggtgcagccaaggcccgttacctcgatttcatccgc
gatggcgcgccgcaatcggcgccggagccgtgcgcggcctgttcgctgtgcgggtggcgc
gatcactgcgacgagcagctcgacgccgccgaccatctcagccgcgtggcgggcctgggc
aaaccgcagcggcgcaagcttgaggacgccgggatcaccaccctcgccgcgctagcgggg
gtaggtgaggataccaaggtgccgcgcatggccgcggcgacgttcgccaagctgcgcgcg
caggccgcgctgcagctggcgcggcgcgagggtggcgcgccggtggtggttcccctgccc
atcgagcctgggcgtggcttcgccaccctgcccccgccgcacccggccgacctgttcttc
gacctcgaaggcgatccgctgaccgaaggcggcctcgattacctgtggggcgtgcatcac
gtggtggacggccatcctgagttccgcttccgctggggccacgaccgcgcggcagagcgg
gtcgccttcgagagcacggtggactggattgtcgcgcacctggcggcgaacccgggcgcc
cacgtctaccactacgcaccttacgaagtgaccgcgctgcgtcgcctctccaccctccac
gcaagccgcgaggacgcgatcgacacgctgctgcgcgagcgcaagctggtcgacctctac
ggcgtgctgcgccagtcgatccgcacctcggagccgaacctctcactcaagacgatggag
gtgttcttcgccaggaagcgcgatcaggcggtcacgaacgccggagattcgatcgtcgag
tacaaaagctggcaggactcaggtgagcagaagatcctcgacgacatcctcgaatacaac
aaggtggactgcgagaacaccgaggccctacgcgactggctcgtctcgctgcgcatggac
ggcctgccctggcgcgaggtcggcctcgccaccgccctgcccgacgacaaggccgaggcc
cgcgccgaggcggaggccgccgcctccgcgctcagcgccgcgatcgccgcggggccactg
ccgcccagcgcggagggccgcgcgctggtcgaccacctgacccagttccaccgccgcgcc
gacaagcccgcactgtgggccatgttcgaccgctgtgaacgcgagctggaggagatggtc
gaggacggcgagtgcatcggcgacatcgctcccctgcccgacgccgagggtgcgtggcag
tggcaggagaaacgcagcaccctggcgcgctatcgcttcgcaccgcaggacaccaagctg
cgcaagggctcggccgtgctccacgcgccgacgctggccaagctgggcaaaatcgacagc
atcgatgcgaccgccggacagctcaccctcaagcgccagctcaagccgggcgaggccttt
cccgaaagcggctcgctgatccccgaaccggcggtgaacaaccgcccgctgatcgccgcc
gtgcgccgcgtcgccgcgcactgggcggcgggcggcgagagctaccgcgcgctcctcgat
ctcatcgaacgcacgccgccgcgcctgcacgactggcccactgccgggcaggccggacag
gctggcgctctggtgcaaccgagcgaaaatctggtcgaggccgccaccttgcgctgcctg
gcgatggacgacagcgcgctgttcatccagggcccgcccggcaccggcaagaccttcacc
agcgcgcacgtgatcgtggcgctaatggcggcgggcaagaaggtcggcgtctcgtccaac
agccacaaggcggtgaataacctgctcacgaaggtcgaggaaatcgccatcgaacagggc
gtcagcttcgtcggcgtcaagaaggccagcaagaccgatcccggcagctacctgggcgga
gtgatcatcaccgacgtcgagagcaacggcgacgcctgggattaccaccccgacctcatc
ggcggcaccgcctggctgttcgctgacgagaccgccgaccagtcgctcgactacctgttc
gtcgacgaggcgggacaggtctcgctcgggcacctgctggcgatgggcgcggcggcgcgc
aacatcgtgctggtgggcgaccagatgcagctcgcccagcccatccagggctcgcacccc
ggcgaaagcggcctctccgcgctcgactacctgctgcagggcgaggcgaccgtcgccccc
gatcgcggcatcctgctcgacaccagctggcgcatgcaccccgacatttgtggcttcatc
tcggacgcggtctacgacggacggctgcaggcccatcccgactgcgcccgccagaccctc
cacctgcccgaaatccacgacccggcgctggcaaaccatggcatccgcttcgtgccgatg
gaccacgccgggcgcggccagcgcagcgatgaggaagtcgcccgcgtggtcgacttgtgc
ggccagctgatcggcacccccttcactgaccgcgccgggcagacggacaagctgagctgg
aacaacatcctgatcgtcgccccgtacaatatgcaggtgatagccttggccgaagcactt
cccgccgcggcgcgggtgggcacggtggacaagttccagggccaggaggcggaagtcgtg
atcgtcagcctcgccacctccagccccgacgacttgccgcgccacgtcgattttttctac
tcgaagaaccgcctgaacgtggcaatcagccgcgcgcggacgctggcggtggtgctggca
aacccgaagttgttggaactggatgcaaaatcggttgagcatctgcggctagtgaatacg
ctggcatggattgcgggcgaggggaagtaa
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