Novosphingobium sp. BL-52-GroH: ACFFDA_08975
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Entry
ACFFDA_08975 CDS
T11269
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03030
DNA replication
novb03430
Mismatch repair
novb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFFDA_08975
03430 Mismatch repair
ACFFDA_08975
03440 Homologous recombination
ACFFDA_08975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novb03032
]
ACFFDA_08975
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_08975
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFFDA_08975
DNA replication proteins [BR:
novb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFFDA_08975
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFFDA_08975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
XKH11129
LinkDB
All DBs
Position
unnamed2:279064..279942
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AA seq
292 aa
AA seq
DB search
MAPPPIDLLADAARALAAHPDFRVLRRLVPVDHLHAGPAVGKTRIGIALDVETTGLDRET
DKIIELAVQRFRFDELGRIVQIGTPRVWREDPQRPLDPRITQLTGLTDDDLAGQAIDESA
AIAILASADLIVAHNAAFDRPFVDRRLPAVAGRPWACSMAELDWLELGFDGKALGYLVAQ
CGWFFEGHRAENDILALIYLLGHAAPDGETILAKLVACSERPSYRVNAVDAPFEGKDALK
ARGYRWDAAMRFWGRTVPEGDLESERTWLLQDIYAGHGEPAFHPQSACERYR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccccgatcgacctgctcgcagacgccgcgcgtgccctcgccgcgcacccg
gacttccgcgtgctccggcggctggtgccggtggatcacctccacgcggggccagccgtg
gggaaaacgcggatcggcattgcactcgatgtcgagacgacgggcctcgaccgcgaaact
gacaagatcatcgaactggccgtccagcgcttccgcttcgacgaacttggccggatcgtc
cagatcggcacgccgcgggtctggcgcgaagacccgcagcgccccctcgacccccgcatc
actcagctcaccggtcttaccgatgacgacctcgcaggtcaggcgatcgacgagtccgcc
gccatcgcaatcctcgcctccgccgacctcatcgtcgcccacaatgccgccttcgaccgg
cccttcgtcgatcgccggctcccggcggtggccggccggccctgggcctgttccatggcc
gaactcgactggctggagctgggcttcgacgggaaggctctcggctacctcgtcgcgcag
tgcgggtggttcttcgagggccatcgcgccgagaacgacatcctcgcgctcatctatctg
ctcggccatgcagccccggacggcgaaacgatcctcgccaagctggtcgcctgctcggag
cggccgagctaccgggtgaacgccgtcgatgccccgttcgaaggcaaggatgccttaaag
gcgcgcggctatcgctgggacgcggccatgcgcttctggggcaggaccgtccccgaagga
gacctggaaagcgaacggacctggctgctgcaggacatctacgccgggcacggcgagccc
gccttccatcctcagtccgcctgcgagcgatatcgctag
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