Novosphingobium sp. BL-52-GroH: ACFFDA_10005
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Entry
ACFFDA_10005 CDS
T11269
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03030
DNA replication
novb03430
Mismatch repair
novb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFFDA_10005
03430 Mismatch repair
ACFFDA_10005
03440 Homologous recombination
ACFFDA_10005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novb03032
]
ACFFDA_10005
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_10005
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFFDA_10005
DNA replication proteins [BR:
novb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFFDA_10005
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFFDA_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
XKH11313
LinkDB
All DBs
Position
unnamed2:complement(494474..495286)
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AA seq
270 aa
AA seq
DB search
MSVDVETACGRVSSICQIGIVGFKDGKIAFEYETLIDPRDYFSSFNTRIHGITENHVIGK
PCFGDLHEVIDKHLASRVTVAHSYFDKGALTAACRVHDRRPIEANWLDSVRVAKRVWPQL
ASHRLNVVSKHLGIRLKHHDALSDARAAGLIVVKASEEAGIPLAGWLTVPKRASAEPAPK
PALDGPLVGQRVAILGEPRHGELAHRIAAMGGRIVTAVGKTTTMLVVCGDEPFGYIRYDT
QFRRARELQDLGHAIEITSTAALGARYSDL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtcgatgtcgaaacagcctgtggccgggtcagcagtatctgccagatcggcatc
gtcggcttcaaagacgggaagatcgccttcgaatatgagacgctgatcgatcccagggat
tatttcagcagcttcaacacccgcattcacggcatcaccgagaatcatgtcatcggcaag
ccgtgcttcggcgatctgcacgaggtgatcgacaaacatctggcgagccgcgtgacagtg
gcccattcctatttcgacaagggcgcgctcaccgccgcctgccgggtccatgaccgcagg
ccgatcgaggcgaactggctcgacagcgtgcgggtcgccaaacgcgtctggccgcaactt
gccagccaccggctcaatgtcgtctcaaagcatctcggcattcgcctcaaacatcatgat
gcgttgagcgacgcccgcgcggccggcctgatcgtcgtcaaggccagcgaagaagcgggc
attcctctagcgggctggctgaccgttcctaagcgcgcttccgccgagccggcccccaag
cccgcgctcgacggtccgctcgtcggccagcgcgtcgcgatcctgggtgagccacgtcat
ggcgaactggcccatcgcatcgccgcgatgggcggccggatcgtgacagcggtcggcaag
accacgacgatgctcgtggtctgcggggacgaacccttcggctatatccgctacgacacg
cagttccgccgcgcccgtgaattgcaggatttagggcacgcgatcgaaatcacgagcacc
gccgcgctcggggcacgctacagcgacctctga
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