Novosphingobium sp. BL-52-GroH: ACFFDA_10275
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Entry
ACFFDA_10275 CDS
T11269
Name
(GenBank) efflux RND transporter permease subunit
KO
K18307
multidrug efflux pump
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFFDA_10275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_10275
Transporters [BR:
novb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ACFFDA_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
XKH11807
LinkDB
All DBs
Position
unnamed1:complement(42359..45448)
Genome browser
AA seq
1029 aa
AA seq
DB search
MHFTDLFIRRPILSLVVSMLILLVGVSATFSLPVRQYPYLENATITVSTSFPGATQDVMQ
GFVTTPIAQSIATASGIEYLTSTSKQGSSTVKARLVLNADADRAMTEVLAKVQQVKYQLP
AGTTDPVITKASEGGTAAQYVAFYSKTLSIQQITDFVTRVAQPMFTSIPGVAFAEVSGGR
ALAMRIWIDPVKLAARGLSASDISTALKANNVQAAPGQLKGQLTVTNITADTDVRSLDDF
RQMVIKTGAEGAGLVRLGDVATLELGGQNYDNASFADGTPAVFLALEQSPDGNPLEIVKA
AQGMVPKLREMAPPGLTISPNYDVAKFVNASIDEVIHSLIEAIVIVIIVIFLFLGSVRAV
IIPVVTIPLSLVGTAALMLACGFSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGLS
PVKAAMVGAREIIAPVIAMTITLAAVYAPIGLMGGLTGALFREFAFTLAGSVLVSGVIAL
SLSPMMSSLLLRSKQSESRLAKAIEHRMEQLTAAYGRLLAKTLAARAAVLLVGVVVLAGI
VILFSGTRHELAPTEDQGAVIIATRAPQYAGVGYTAHYAAMVQKLFKALPEYDNSFIHVN
DGGGGTHTSFGGVILKDWTERKRSGDDIQQVLQAAGGAIDGETVTAFQLPPLPGGGGGLP
VQMVVRSAGDVRSLYDATEKLKAAAWASGLFLFVDSDLAFDSEAAHITVDRSKANDMGVT
MEAIADTLAVLVGENYVNRFNFHDRSYDVIPQVAGVDRVTPDDLGRFYVKTRSGALVPLS
TVTKIEMRPQANQLTQFNQMNSVTLEALPAPGVTMGQAVAFLESQPLPTGMNIDWLSDSR
QFVQEGNRLVVSFGFALVVIFLVLAAQFESLRDPLVILVTVPLAVCGALVPLWLGYGTLN
IYTQIGLVTLIGLISKHGILMVTFANQIQQEEGLGRIEAIEKAAAVRMRPVLMTTAAMVA
GLVPLLFAGGAGAASRSAIGLVVVTGMLVGTLFTLFVLPTVYSFLAVNHRAVAQSDRARD
LAAMETADA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcaccgaccttttcatccgccgcccgatcctgtcgctcgtcgtcagcatgctc
atcctgctggtcggcgtcagcgcgaccttctcgctgccggtccggcaatatccttatctg
gagaacgccacgatcacagtgtcgaccagctttcccggcgcgacccaggacgtgatgcag
ggcttcgtcacgacgccgatcgcgcaatcgatcgcgaccgcgagcggcatcgaatatctg
acctcgacatcgaagcagggcagcagcacggtcaaggcccggctggtgctcaacgccgac
gccgaccgggcgatgaccgaggtgctcgccaaggtgcagcaggtcaagtaccagctcccg
gcgggcacgaccgacccggtcatcaccaaggcgagcgagggcggcaccgccgcccaatat
gttgccttctacagcaaaacgctgtcgatccagcagatcaccgacttcgtcacccgcgtc
gcccagccgatgttcaccagcatccccggcgtcgccttcgcggaggtctccggcggccgg
gcgctggcgatgcgcatctggatcgacccggtgaagctggccgcgcgcggcctgtctgcc
agcgacatctccaccgcgctcaaggcgaacaatgtccaggcggcgccgggccagctcaag
gggcagctcaccgtcaccaacatcaccgccgacaccgatgtccgcagcctcgacgatttc
cgccagatggtcatcaagaccggcgcggaaggcgccggcctagtccggctgggcgacgtc
gcgacgctggaactgggcggccagaattacgacaacgcttccttcgcggacggcaccccc
gccgtcttcctcgccctggagcaaagcccggacggcaacccgctggagatcgtcaaggcc
gcgcagggcatggtgcccaagctgcgcgagatggccccgcccggcctcaccatttcgccc
aactatgatgtggcgaagttcgtcaacgcctctatcgacgaggtgatacactcgctgatc
gaggcgatcgtgatcgtcatcatcgtcatcttcctgttcctgggatcggtgcgcgcggtg
atcatcccggtcgtcacgatcccgctctcgctggtcggcacggcggcgctgatgctggcc
tgcggcttctcgctcaacctcctgaccctgctggcgatggtgcttgcgatcggcctcgtg
gtcgacgatgcgatcgtggtggtggagaatatccaccgccatatcgaggagggactgtcg
cccgtcaaagcggcgatggtcggtgcgcgcgagatcatcgcgccagtgatcgcgatgacc
atcacgctggcggccgtctatgcgccgatcgggctgatgggcgggctgaccggcgcgctg
ttccgcgagttcgccttcacgctggccggatcggtcctggtgtccggcgtgatcgcgctg
tcgctgtcgccgatgatgagttcgctgctgctgcgttccaagcagagcgaatcccgcctt
gccaaggctatcgagcaccggatggagcagctcaccgccgcctatggcaggctgctcgca
aagacgctcgccgcgcgcgcggcggtgttgctggtgggcgtggtggtgctggcgggcatc
gtcatcctgttcagcggcacgcggcacgagctggcgccgaccgaggaccagggcgccgtg
atcatcgcgacccgcgcgccgcaatatgccggcgtcggctacaccgcccattatgcggcg
atggtgcagaagctgttcaaggcgctgcccgaatatgacaacagcttcatccatgtgaac
gatggcggcggcggcacccataccagtttcggcggcgtcatcctcaaggactggacggag
cggaagcgctccggcgacgacatccagcaggtgttgcaggccgccggcggggcgatcgac
ggggagaccgtgaccgccttccagctcccgcccctgccgggcggcggcggcggcctgccc
gtccagatggtcgtgcggtcggccggcgacgtccgctcgctctatgacgcgaccgagaag
ctcaaggcggcggcctgggcgagcgggctgttcctgttcgtcgacagcgaccttgccttc
gacagcgaggccgcgcacatcaccgtcgaccgcagcaaggccaacgacatgggcgtgacg
atggaggcgatcgccgacacgctcgcggtcctcgtcggcgagaattacgtcaaccgcttc
aacttccacgaccgttcctatgacgtgatcccgcaggtcgcgggcgtcgaccgcgtgacg
cccgacgatcttggccgcttctacgtgaagacccgttccggcgcgctggtcccgctttcg
actgtcacgaagatcgagatgcgcccccaggcgaaccagttgacgcagttcaaccagatg
aactcggtcacgctcgaagccttgcccgcccccggcgtcaccatgggccaggcggtcgcc
ttcctcgaatcccagccgctgccgacggggatgaacatcgactggctcagcgacagccgc
cagttcgtgcaggagggcaaccggctcgtcgtctctttcggcttcgcgctcgtcgtgatc
ttcctcgtcctcgccgcgcagttcgagagcctgcgcgacccgttggttatcctcgtcacc
gtgccgctggcggtgtgcggcgcgctggtgccgctgtggctgggctacggcacgctcaac
atctacacccagatcgggctggtgacgctgatcggcctgatctccaagcacggcatcctg
atggtgacgttcgccaaccagatccagcaggaggagggcctgggccgcatcgaggcgatc
gagaaggccgccgccgtccgcatgcggccggtgctgatgaccaccgccgcgatggtggcg
ggcctcgtgccgctgctgttcgcgggcggcgcgggcgcggccagtcggtctgcgatcggc
ctcgtcgtagtcaccggcatgctggtcggcacactgttcaccctgttcgtgctgccgacg
gtctacagcttcctggccgtcaaccaccgtgctgtggcgcagagcgaccgggcgcgcgac
ctcgccgcgatggagacggccgatgcgtaa
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