Novosphingobium sp. BL-52-GroH: ACFFDA_11945
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Entry
ACFFDA_11945 CDS
T11269
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_11945
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_11945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XKH11640
LinkDB
All DBs
Position
unnamed1:complement(385809..388091)
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AA seq
760 aa
AA seq
DB search
MQIFRRALIIGTALTSPFAAVAQAQQQPAAPAQQAEEAQGLQDIVVTAQRREERLQDVPV
AVTAFGTAELEKRQIGDVQALTQNAPAITFSATPYGNNDLILAIRGVAPGGVLPNVDQAV
GTYVDGIYYARSEGSNFALVDIASAEVLRGPQGTLFGRNTIGGALNIATNKPSYEHSGSL
KLAYGNYNAITAQGIANLPLVDDKLAARVVLAHVQHDGWGENARFGDVADQNDNFVRASL
RADPAEGVRFDLIGDYYAGKNHQSLWVLRDYLPGTSPAAYAPYVAPKGSRVSQQGFNPLN
QSEIYTLTGIATVDLGFAELKSITGYRNMDFQGANDQDGTPLPTVDVLEFEFVGDQFSQE
LQLTGESADSSLVWVTGAYYFREKVRNTGLVRAGATIQVNELIPENESLSAFAQLTYEVT
PGLRLTGGLRYVVDHRDITYRRPLFPVAAAFANTVTADLPAGAIGAQTCPYATLGLTTDA
VKCSFSPKRITFKTVPFTVGIDYKPDADSLLYAKFARGFRAGGHQQPTGTTVTFFTPFKE
EKVDSWEVGAKLSLFDRRLQFAASGYYSLYSDVQQNSLLSSTPSIVIAVVNAGKERIYGA
EFEATALLGDLRLSGSLGLIEPEFTAGPYKDTSVPAVSKVTWAVSGDYPIELSDGSEIEL
HADYNWRSKVNFLNIGSVGAAGLVPYSAFQAAAVTQEAYGLLAARISYKLRNSDLTFSLF
GKNLTNEYFAGRTGSLAGANFNSIVLGEPRTYGVSLSASF
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttcgtcgcgcgctgatcatcggcactgcattgacatcgccctttgcggcg
gttgctcaggcccagcagcaacccgcggcgcccgcgcagcaggccgaggaggctcagggg
ctgcaggacatcgtggtcaccgcccagcggcgcgaggagcggttgcaggacgtcccggtc
gccgtgaccgcgttcggcactgccgaactcgagaagcgccagatcggcgacgtccaggcg
ctgacgcagaacgcgcctgcgatcaccttctcggctacgccctacggcaataacgacctg
atcctcgccattcgtggtgtggccccgggcggcgtgcttccgaatgtcgatcaagcggtc
ggcacttatgtcgacggcatctattatgcgcggtcggagggcagcaacttcgcgctggtc
gatattgcatcggcagaagttctgcgtgggccgcagggcacgctgttcggtcgcaacacg
atcggcggcgcgctgaacatcgcgaccaacaagccgagttacgagcacagcggttcgctc
aagctggcctatggcaattacaatgccatcaccgcccagggcatcgccaacctgccgctg
gtcgacgacaagctggccgcacgggtcgtgctcgcccatgtccagcatgacggctggggc
gaaaacgcgcgcttcggcgatgtggcggatcagaacgacaatttcgtccgcgccagcctg
cgcgccgatcctgccgagggtgttcgctttgacctgatcggcgactattatgcgggcaag
aaccaccagtcgctgtgggtactgcgcgactatctgcctggcacgtcgcccgccgcctat
gcgccctatgtcgcgcccaagggcagtcgggtcagccagcagggcttcaatccgctcaac
caatcggaaatctacacgctgaccgggatcgcaaccgtcgatctgggatttgccgaactg
aagtcgatcaccggttaccgcaacatggacttccagggcgcgaacgatcaggacggcacg
ccgctgccgacggtcgatgtgctcgaattcgaatttgtgggcgaccagttcagtcaggag
cttcagctgaccggcgagtcggccgattcgagcctggtatgggtgacgggcgcctattat
tttcgtgaaaaggtccgcaacaccggactcgtccgcgccggcgcgacgatccaggtcaat
gaactgatcccggagaatgaatcgctcagcgccttcgcgcagctgacctatgaggtgacg
cccggcctccggctgaccggcggcctgcgctatgtcgtcgatcaccgcgacatcacctat
cggcgtccgctcttcccggtcgcggccgcctttgccaacaccgtcaccgccgacctgccg
gccggcgcgatcggcgcgcagacctgtccctatgcgacgctcggcctgacgacggatgcc
gtgaagtgcagcttcagcccgaaacggatcacgttcaagaccgtgccgttcacggtcggc
atcgactataagccggacgccgacagcctgctctatgccaagttcgcacgcgggttccgc
gccggcgggcatcagcagccgaccggcaccaccgtcacgttcttcaccccgttcaaggag
gagaaggtcgacagctgggaagtcggtgcgaagctctcgctgttcgaccgcaggctgcaa
ttcgccgcttcgggctactactcgctgtacagcgatgtgcagcagaactcgctgctgtcc
agcacgccgtcgatcgtcatcgccgtcgtcaatgcgggcaaggaacggatctacggcgcc
gaattcgaggcgacggccctgctgggcgatctgcgcctgtcgggctcgctcggcctgatc
gagccggaattcacggctggcccgtacaaggacacgtcggttccggcagtgtccaaggtc
acctgggcggtcagcggcgactatccgatcgaattgtcggatggcagcgagatcgagctg
cacgccgactataactggcgatcgaaggtcaatttcctgaacatcggttcggttggcgcg
gctgggctggttccgtacagcgcattccaagcggcggcggtcacgcaggaagcctatggc
ctgctcgccgcgcgcatttcgtacaagctgcggaactcggacttgaccttctcgctgttc
ggcaagaacctgaccaacgaatattttgcgggccggaccggatcgctggcgggcgcgaat
ttcaattcgatcgtgctcggggagccacgcacctacggggtgtcgctatctgcaagcttc
taa
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