Novosphingobium sp. BL-52-GroH: ACFFDA_12825
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Entry
ACFFDA_12825 CDS
T11269
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_12825
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_12825
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XKH13620
LinkDB
All DBs
Position
1:complement(32127..34931)
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AA seq
934 aa
AA seq
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MPLRNEISAIGTSSCMAIAAALVAAALPGAARAQESAAPAADETAGDASTIVVTGFRASL
QNAINQKRTAEQIVESVSAEDIGKLPDASIAESIARLPGLTSQRVSGRSNAIAIRGFAPD
FSTTLLNGREQTSTGDNRAVEYDQYPSEVVSAVNVYKTPMASLVGQGLSGTVDMRTIRPL
EAGKRIVTVGARGSYADLGKLNAGSTDKGYRVNAMYVDQFANDTLGIALGASYTNEPYQI
QEFNSWGYPETADGDNVIGGSKSYVTSTKLKRLGFNGTLEWRPVPELTTTIDAFYSNFKD
DQIKRGIELPLFWDPDTASLNPGATVEDGFVTAGSFSGVKGVVRNDVFQRHAKLYSFGWN
TKWEGDDGWNAFFDASYSKTDRNELNVETTAGTGRNTIGATDTIGFASGTKGTSFTHGLD
YGNYDLIQLTSPQGWGGTQIAPDGTAILNGQDGYYNDRRIKDELWQFRVEVEREFEAGPL
HSVQAGWNYTNRSKTLVPEEYFLGLAANTDGLTSLVVPEEYRRGTSDLKYLGLGQVISYD
PLAMVRDGIYNLVANPYGDVVVKSYAIRERIMTGYVQGNIDADIGSAHLTGNFGVQANWT
DQNSRGATAVLLDPPTNPNGSANVGTLLRNESTDYLDVLPSLNLSLRFPGEFVIRFAAAR
EIIRPRLDDMRASESFEYSFVALPDGSEVAAVTGKSGNPDLRPWRANALDLTFEKYFAGK
GYIAAQFYWKELKSYIYNQDLVVPTDSLALQPPGNGIPISDTAVINVPINGKGGKLYGVE
LATTLPFDAFVSALEGFGVTGSVAYTKTKIQPTPGESSSDLPGYSKWVANGTAYFEKAGF
NARGSVRYRSTFIGEVSGFAANRVRRRAAAETIIDAQIGYDFQPGSALEGLSLYVQGQNL
TDAPFVTTNPGDNREVIDYQTYGRRFLAGFTYKF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgcaatgagatttccgccatcgggacgtcgtcctgcatggccatcgccgcc
gcactcgtcgccgccgccctgccgggtgcagcacgcgcacaagagagcgcggcaccggct
gcggacgagaccgccggcgacgcgagcaccatcgtcgtcaccggctttcgtgccagtctc
cagaacgcgatcaaccagaagcgcaccgccgagcagatcgtggaatcggtctcggccgag
gacatcggcaagctgcccgacgcctcgatcgcggaatcgatcgcgcgcctgccgggcctg
acttcgcagcgcgtctccggccggtccaacgccatcgccatccgcggcttcgcgcccgac
ttctcgacgacgctgctcaacgggcgcgagcagacctccaccggcgacaaccgcgcggtc
gaatacgaccagtatccgtccgaagtcgtcagcgccgtcaacgtctacaagacgccgatg
gcgagcctggtcggccagggcctctcgggcacggtcgacatgcgcacgatccgcccgctc
gaggcgggcaagcgcatcgtcaccgtcggtgcgcgcggttcctacgcggacctcggcaag
ctcaacgccggatcgaccgacaagggctaccgcgtcaacgcgatgtacgtcgaccagttc
gccaacgacactctcggcatcgcgctgggcgccagctacaccaacgagccctaccagatc
caggagttcaactcctggggctatcccgaaaccgcggatggcgacaacgtgatcggcggc
tcgaagtcctacgtcacctcgaccaagctcaagcgcctgggcttcaacggcacgctcgaa
tggcgcccggttcccgagctgaccacgacgatcgacgcgttctattccaacttcaaggac
gaccagatcaagcgcggcatcgagctgccgctgttctgggaccccgacaccgcctcgctg
aacccgggcgccaccgtggaggacggtttcgtcacggccggcagtttctctggcgtcaag
ggcgtcgtgcgcaacgacgtgttccagcgccacgccaagctctattcgttcggctggaac
accaagtgggaaggcgacgacggctggaacgccttcttcgacgccagctattccaagacc
gaccgcaacgaactgaacgtcgagaccaccgcgggcacgggccgcaacaccatcggcgcc
accgacacgatcggcttcgccagcggcaccaagggcaccagcttcacccacgggctggac
tacggcaactacgacctgatccagcttaccagcccgcaaggctggggcggcacccagatc
gcgcccgacggcaccgccatcctcaacggccaggacggctactacaacgaccgcaggatc
aaggacgaactctggcagttccgcgtcgaggtcgagcgcgagttcgaggcggggccgctg
cactcggtccaggccgggtggaactacaccaaccgctccaagacgctggtgcccgaggaa
tacttcctgggcctcgccgccaataccgacggcctgaccagcctcgtcgtgcccgaggaa
taccgccgcggcaccagcgacctcaagtacctcggcctcggccaggtcatcagctacgat
ccgctggcgatggtgcgtgacggcatctacaacctggtcgccaacccctatggcgacgtg
gtggtcaagagctacgccatccgcgagcggatcatgaccggctacgtccagggcaacatc
gatgccgacatcggttcggcccacctgaccggcaacttcggcgtgcaggcgaactggacc
gaccagaactcgcgcggggcgaccgccgtgctgctcgacccgccgacgaaccccaacggc
tcggccaacgtcggcacgctgctgcgcaacgaaagcaccgactacctcgacgtgctgccc
agcctcaacctgtcgctgcgcttccccggcgagttcgtgatccgcttcgccgccgcgcgc
gagatcatccgcccgcgcctcgacgacatgcgcgcctccgaaagcttcgaatacagcttc
gtcgccctgcccgacggttcggaagtagctgcggtaacgggcaaatcgggcaatcccgac
ttgcgcccgtggcgcgccaacgcgctcgacctcacgttcgagaagtacttcgccggcaag
ggctacatcgccgcgcagttctactggaaggagctgaaaagctacatctacaaccaagac
ctcgtggtccctaccgacagcctcgcgctccagcctccgggcaacggcatcccgatctcc
gacacggccgtcatcaacgtgccgatcaacggcaagggcggcaagctctacggcgtcgaa
ctggcgaccacgctgcccttcgacgcgttcgtttcggcattggaaggcttcggcgtgacc
gggtcggtggcctataccaagaccaagatccagccgacgccgggtgaaagctccagcgac
ctgccgggctattccaagtgggtcgccaacggcaccgcctacttcgagaaggccggcttc
aacgcccgcgggtcggtgcgctaccgttcgaccttcatcggcgaagtctcgggcttcgcg
gccaaccgcgtgcgtcgccgcgccgccgccgagacgatcatcgacgcgcagatcggctac
gacttccagcccggcagcgcactggaaggcctgtcgctctacgtgcagggccagaacctg
accgacgcgccgttcgtcaccaccaaccccggcgataaccgcgaagtgatcgactaccag
acttatgggcgccgtttcctggccgggttcacttataagttctaa
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