Novosphingobium sp. BL-52-GroH: ACFFDA_13485
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Entry
ACFFDA_13485 CDS
T11269
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00260
Glycine, serine and threonine metabolism
novb00460
Cyanoamino acid metabolism
novb00630
Glyoxylate and dicarboxylate metabolism
novb00670
One carbon pool by folate
novb00680
Methane metabolism
novb01100
Metabolic pathways
novb01110
Biosynthesis of secondary metabolites
novb01120
Microbial metabolism in diverse environments
novb01200
Carbon metabolism
novb01230
Biosynthesis of amino acids
novb01240
Biosynthesis of cofactors
novb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ACFFDA_13485 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ACFFDA_13485 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACFFDA_13485 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ACFFDA_13485 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACFFDA_13485 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ACFFDA_13485 (glyA)
Enzymes [BR:
novb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ACFFDA_13485 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
XKH13748
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Position
1:complement(178045..179343)
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AA seq
432 aa
AA seq
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MTVETAIRSPGFFTDTIAQSDPDVAKAIGHELKRERKQIELIASENIVSKAVLEAQGSVL
TNKYAEGYPGKRYYQGCEPSDAVETLAIERAKKLFGCGFANVQPHSGAQANGAVLLATVK
PGDTVMGMSLDAGGHLTHGAKAALSGKWFNAVQYGVTRDTHLIDYDQVEALAREHNPKLI
IAGGSAYPRIIDFKRMREIADAVGAIFQVDMAHFAGLVAAGEHPSPFPHAHIATTTTHKT
LRGPRGGMILTNDEALAKKINSAVFPGLQGGPLMHVVAAKAVAFGEALRPEFKDYSKRVI
ENAKVLADTLAARGAAIVSGGTDTHLALVDLSPLGVTGKDADEALERAGITCNKNGIPFD
PLPPMKTSGIRVGSPAGTTRGFGPEEFREIGNMVADVLDGLAKCGEAGDAQVEQNVRTRV
EALCDRFPIYED
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagaaaccgccatccgttcacccggcttcttcaccgacacgatcgcgcagagc
gatcccgacgtcgccaaggcaatcggccatgagctgaagcgcgagcgcaagcagatcgaa
ctgatcgcttcggaaaacatcgtctccaaggcggtgctcgaggcgcagggctcggtgctg
accaacaagtacgccgaaggctatcccggcaagcgctactaccagggctgcgagccttcg
gacgcggtcgaaaccctcgccatcgagcgcgccaagaagctgttcggctgcggcttcgcc
aacgtccagccccactcgggtgcccaggccaacggcgcggtccttctcgcgaccgtcaag
cccggcgacaccgtcatgggcatgagcctggatgccggcggccacctcacccacggcgcc
aaggccgcgctttcgggcaagtggttcaacgccgtgcagtacggcgtcacccgcgacacc
cacctgatcgactacgaccaggtcgaggcgctcgcacgcgagcacaaccccaagctcatc
atcgccggcggctccgcctatccgcgcatcatcgacttcaagcgcatgcgcgagatcgcc
gatgcggtgggcgcgatcttccaggtcgacatggcgcacttcgccggcctcgtcgcggcg
ggcgaacacccctcgcccttcccgcacgcgcacatcgccaccaccaccacgcacaagacg
ctgcgcggcccccgtggcggcatgatcctgaccaacgacgaggcgctggccaagaagatc
aactcggcggtcttccctggtctccagggcggcccgctgatgcacgtcgtcgccgccaag
gcggtggccttcggcgaagcgctgcggcccgagttcaaggactactccaagcgcgtcatc
gagaacgccaaggtcctcgccgacacgctggccgcgcgcggcgccgcgatcgtctcgggc
ggcaccgacacgcacctggcgctcgtcgacctctcgccgctgggcgtcaccggcaaggac
gccgacgaggcgctcgagcgcgccggcatcacctgcaacaagaacggcatcccgttcgac
ccgctgccgccgatgaagaccagcggcatccgcgtcggctcgcccgccggcaccacccgc
ggtttcggcccggaagagttccgcgagatcggcaacatggtcgccgacgtcctcgacggt
cttgccaagtgcggtgaagcaggcgacgctcaggtggagcagaacgtgcgcacgcgcgtt
gaagcgctgtgtgatcgtttccccatctacgaggactga
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