Novosphingobium sp. BL-52-GroH: ACFFDA_13640
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Entry
ACFFDA_13640 CDS
T11269
Symbol
rodA
Name
(GenBank) rod shape-determining protein RodA
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACFFDA_13640 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
novb01003
]
ACFFDA_13640 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
ACFFDA_13640 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
novb03036
]
ACFFDA_13640 (rodA)
Enzymes [BR:
novb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
ACFFDA_13640 (rodA)
Glycosyltransferases [BR:
novb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ACFFDA_13640 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
ACFFDA_13640 (rodA)
Chromosome and associated proteins [BR:
novb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ACFFDA_13640 (rodA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
Ycf9
Motif
Other DBs
NCBI-ProteinID:
XKH13774
LinkDB
All DBs
Position
1:complement(210255..211367)
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AA seq
370 aa
AA seq
DB search
MSRSIVPEAISRQPWQMLIPLCALVSLGAAVLYSAAGGGLQPYALSHVVRFCVFLVMAII
ISHTNRNLFRMAAYPVFGGILLLLVLVELIGAVGGGSQRWLNLGFMSLQPSELMKPAIVL
VLARFYETLPHAMTASWRGLVPAGVLIGLPALFVMTQPDLGTALAICFGGAVTMFLAGLP
LWWFMSAGGALMVVAPVAFFTLLHDYQRNRVLVFLDPESDPLGTGYHITQSKIAIGSGGI
FGKGFGNGTQSHLQYLPEPHTDFVFATMAEEWGLVGGLFVLAVFAIVLGWGMGVARRAPD
RFSCLLAAGMTATMFFYVMINLMMVMGLAPVVGIPLPFMSHGGTSMLTNMICLGTIMAVN
RWNQGRGSLG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcgatcgttcccgaagcgatctcgcgccagccctggcagatgctcattccg
ctgtgcgccctggtgtcgttgggcgcggccgtgctctattcggcggccggaggcggcctg
caaccttacgccttgagccatgtggtgcgcttctgtgtgttcctggtcatggcgatcatc
atttcgcacacgaaccgcaatctgttccgcatggccgcctacccggtcttcggcggcatc
cttttgctgctggtgctggtcgagctgatcggcgccgtcgggggcggcagccagcgctgg
ctgaacctcggcttcatgtcgctgcagccctcggagctgatgaaaccggcgatcgtcctc
gtcctcgcccgattctacgagacactgccccacgccatgaccgccagctggcgcggcctc
gtgcccgctggcgtcctcatcggcctcccggccctgttcgtcatgacccagcccgacctc
gggaccgcgctggcgatctgcttcggcggcgcggtgacgatgttcctcgccggcctgccg
ctgtggtggttcatgagcgcaggcggcgcgctgatggtggtcgccccggtcgccttcttc
acccttttgcacgactaccagcgcaaccgcgtgctggtcttcctcgatcccgagagcgac
cccctgggcactggctaccacatcacccagtcgaaaatcgcgatcggctctggagggatt
ttcggcaagggcttcggcaacggcacccagagccacctgcaataccttcccgaaccccac
accgacttcgtcttcgcgacgatggcggaggagtgggggctggtcggcggactgttcgtg
ctggccgtcttcgcgatcgtgctgggctggggcatgggcgtcgcccgccgcgcacccgac
cgcttctcctgcctcctcgcagccgggatgaccgcgacgatgttcttctacgtcatgatc
aatctgatgatggtcatgggcctcgccccggtggtgggcatcccgctgccgttcatgagc
cacggcggcacgtcgatgctgaccaacatgatctgcctgggtacgatcatggcggtaaac
cgctggaatcagggcaggggttcgctcgggtaa
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