KEGG   Novosphingobium sp. BL-52-GroH: ACFFDA_14075
Entry
ACFFDA_14075      CDS       T11269                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
novb  Novosphingobium sp. BL-52-GroH
Pathway
novb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:novb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACFFDA_14075
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:novb02022]
    ACFFDA_14075
Two-component system [BR:novb02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   ACFFDA_14075
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 HTH_30 AAA_16 Mg_chelatase AAA AAA_2 MCM AAA_30 nSTAND3 TIP49 Xre-like-HTH AAA_19 Phage_NinH
Other DBs
NCBI-ProteinID: XKH15169
LinkDB
Position
1:complement(306919..308367)
AA seq 482 aa
MRVLLLEDDMSIAIVITAALEDEGFGVVHCQTIAERDRQLAGGSFAAMVTDVMLPDGDGI
ETIDRVRALHPDMPIVILSAQNTLDTAVRATDTGAFEYFPKPFDIDELARTVRQAAGATQ
ARLDGDEPVADGLPLVGRSAAMQSVFRMITRVLRNDLTVLILGESGTGKELVAEAIHQLG
NRRSGPFIAVNTAAIPAELIESELFGHEKGAFTGAVARHVGKFEQAAGGTLFLDEIGDMP
MQAQTRLLRALQSGTVRRVGGREEIRLDTRIVAATNKDLEPEIAAGRFREDLYYRLNVVP
IHMPPLRDRRDDIDVLARHFLQHAANEGLPRRQLTAEAAELLSRQPWRGNVRELKNFIYR
MALLAREDLIDVELILPLLSQEPPAPAAAGAMGESNGHAVSHANGADIASAVAQWLTATR
PASGTIYDSAMAAFERPLFAEVLRETAGNQLRAAQALGINRNTLRKRLGELSLDPEEFTR
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcgcgtcctgctgctcgaggacgacatgtccatcgccatcgtcatcaccgcggcgctg
gaggacgaaggcttcggcgtggtccattgccagaccatcgccgagcgcgaccgccagttg
gccggcggcagcttcgccgccatggtgaccgacgtgatgctcccggacggcgacggcatc
gagacgatcgatcgcgtccgcgcgctgcatcccgacatgccgatcgtcatcctctcggcc
cagaacacgctcgataccgccgtgcgcgccaccgataccggcgccttcgagtatttcccc
aagcccttcgacatcgacgaactggcgcgcaccgtgcggcaggcggccggcgccacgcag
gcccggctcgatggtgacgaacccgtggccgacggcttgccgctggtcgggcgcagcgcc
gcgatgcaatcggtcttccgcatgataacgcgggtcctgcgcaacgacctgacggtcctg
atcctgggagaatcgggcaccggcaaggaactcgtcgccgaggcgatccatcagctcggc
aatcgccgcagcggcccgttcatcgccgtcaacaccgccgcgatccccgccgaactgatc
gagagcgagctgttcgggcatgagaagggcgccttcacgggcgccgtcgcgcgccatgtc
ggcaagttcgagcaggcggccggcggcaccctgttcctcgacgagatcggcgacatgccg
atgcaggcgcagacccgcctgctgcgtgcgttgcaatcgggcaccgtgcgtcgcgtcggc
ggccgcgaggaaatccgcctcgacacccgcatcgtcgccgccaccaacaaggacctcgag
cccgagatcgccgccgggcgctttcgcgaggacctctattaccgcctcaacgtggtgccg
atccacatgcccccgttgcgcgaccggcgcgacgacatcgacgtgctcgcccgtcatttc
ctccagcatgccgccaacgagggcctgccgcgccgccagttgacggcggaggcggcggaa
ctgctgagccgccagccctggcgtggcaacgtgcgcgaattgaagaacttcatctaccgc
atggccctgctggcgcgagaggacctgatcgacgtcgaattgatcctgcccctgctcagc
caggaacccccggcacctgcggccgcgggagcgatgggggagtccaacggccatgccgtc
tcccacgccaacggggccgacatcgccagcgcggtcgcgcagtggctcaccgccacgcgg
ccggccagcggcaccatctacgacagcgccatggcggccttcgaacgcccgctcttcgcc
gaggtcctgcgggagaccgccggcaaccagctccgcgccgcgcaggccctgggcatcaac
cgcaacaccttgcgcaagcggctcggcgaactctctctcgaccccgaggaattcactcgt
cgtccataa

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