Novosphingobium sp. BL-52-GroH: ACFFDA_14125
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Entry
ACFFDA_14125 CDS
T11269
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novb03032
]
ACFFDA_14125 (gyrA)
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_14125 (gyrA)
Enzymes [BR:
novb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACFFDA_14125 (gyrA)
DNA replication proteins [BR:
novb03032
]
Prokaryotic type
DNA Topoisomerases
ACFFDA_14125 (gyrA)
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACFFDA_14125 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XKH13864
LinkDB
All DBs
Position
1:316869..319652
Genome browser
AA seq
927 aa
AA seq
DB search
MSDETEIPEHMGPEGEYTRVDIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILWT
SHENGFTAGKPYRKSARIVGDAMGKYHPHGNSAIYDALARMTQDWSMRLPLIDGQGNFGS
MDPDPPASMRYTEARLAKVAEALLADIDKDTVDFQPNYDGAEQEPTVLPARYPNLLVNGA
GGIAVGMATNIPPHNLGEVIDGCFAMMENPAITSEELFQIIPGPDFPTAPLILGQGGARN
AAITGRGSIIMRCRHHIEEARGASRGARSIVLTSIPYQVGKSGLVEKIAEAAKDKRIEGV
SDIRDESNREGVRVVVDLKRDASPEVVINQIWRNTPAQSNFAANMLAIRGGRPETMSLRD
ILQAFIQFREQVITRRTKFELNKARDRAHILLGLVVAVSNLDEVVKIIRGAPNPSEARAR
LIAKEWAIGDIAQYIRLVEAIEPDAEAEGGTYRLSEVQVKAILDLRLHRLTALGRDEIGD
ELKELAVAIEGYLAILADRVKLYDVMRGELQAVRDAYATPRVSEITAAFDGIEDEDLIER
EDMVVTVTMDGYIKRTPLSTFRAQNRGGKGRAGMATKEEDAVTTMFVTSTHTPVLFFSTA
GKVYRLKVYRLPEGGPTTRGRPIVNLLPALDKDETIQTVLALPEDEKEWSKLSVVFATAK
GNVRRNSMDSFANVPSNGKFAMRFDEGDDDHLIGVALLEPADDVLLATRKGRAIRFAGDD
VREFTSRTSTGVRGMVLKDGDRVISLSILHRVGTDSEEREQYLRFAPWKGEKDGESTLSP
ERTEELAKREQFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATQ
AQQLMLVTDQAKLIRLPLSSLRVIGRGSAGVRLFTVSNDEHVVSAVRLDEESEDEAVVAP
VVDETPTPESDVPGSDAPDGHGTEDDA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagaccgaaatccccgagcacatgggccccgagggcgaatacacccgcgtc
gacatcgtcgacgagatgaagacgagctacctcgactacgcgatgagcgtgatcgtgagc
cgcgcgctgcccgatgtccgcgacggcctcaagcccgtccaccggcgcatcctgtggacc
agccacgagaacggcttcaccgcgggcaagccctatcgcaagtcggcgcgtatcgtcggc
gacgccatgggcaagtaccacccgcatggcaactcggcgatctacgatgccctggcgcgc
atgacgcaggactggtcgatgcggctcccgctgatcgacggccagggcaacttcggctcg
atggaccccgatccgccggcctcgatgcgctacaccgaagcgcgcctcgccaaggtggcc
gaggcgctgctggcggacatcgacaaggacaccgtcgacttccagcccaactacgacggc
gccgagcaggagccgacagtgcttcccgcgcgctatcccaacctgctggtcaacggcgcg
ggcggcatcgcggtcggcatggcgaccaacatcccgccgcacaacctgggcgaagtcatc
gacggctgcttcgcgatgatggaaaatccggcgatcacctcggaagagctgttccagatc
atcccgggcccagatttcccgaccgcgcccctgatcctgggccagggcggcgcgcgcaat
gcggccatcaccggccgcggctcgatcatcatgcgctgccgccaccacatcgaggaagcc
cgcggcgcgagccgtggcgcccgctcgatcgtgctgacctcgatcccctaccaggtcggc
aagtccggcctggtcgaaaagatcgccgaggccgccaaggacaagcggattgagggcgtc
tcggacatccgcgacgaatcgaaccgcgaaggcgtgcgcgtcgtcgtcgacctcaagcgc
gacgcctcgcccgaagtcgtcatcaaccagatctggcgcaacacgccggcgcagtcgaac
ttcgccgccaacatgctggcgatccgcggtggacggcccgagaccatgtcgctgcgcgac
atcctccaggcgttcatccagttccgcgagcaggtcatcacgcggcgcaccaagttcgaa
ctgaacaaggcgcgcgaccgggcgcacatcttgctcggcctcgtcgtcgcggtctcgaac
ctcgacgaagtcgtcaagatcatccgcggcgcgccgaacccgtccgaggcccgcgcccgc
ttgatcgccaaggaatgggcgatcggcgacatcgcgcagtacatccgcctcgtcgaggcg
atcgagcccgatgccgaggccgagggcggcacctaccgcctgtccgaggtccaggtgaag
gcgatcctcgacttgcgcctccaccgcctcaccgcgctgggccgcgacgagatcggcgac
gagctgaaggaactggccgtcgcgatcgagggctacctcgcgatcctggccgacagggtc
aagctttacgacgtgatgcgcggcgaacttcaggccgtacgggacgcttacgcgaccccg
cgtgtctccgagatcaccgccgccttcgacgggatcgaggacgaggacctgatcgagcgc
gaggacatggtggtgaccgtcaccatggacggctacataaagcgcaccccgctctcgacc
ttccgcgcccagaaccgcggcggcaagggccgcgccggcatggcgacgaaggaagaggat
gcggtgacgacgatgttcgtcacctcgacccacaccccggtgctgttcttctcgactgcc
ggcaaggtctaccgcctcaaggtctaccgactgcccgaaggcgggccgaccacgcgcggc
cgtccgatcgtcaacctcctgcccgcgctggacaaggacgagacgatccagaccgtgctc
gccctgcccgaggacgagaaggaatggagcaagctctcggtcgtgttcgccacggccaag
ggcaacgtgcgccgcaactccatggattcgttcgccaacgtgcccagcaacgggaagttc
gcgatgcgcttcgacgaaggcgacgacgatcacctgatcggcgtggccctgctcgagcct
gccgacgacgtcctgctcgccacccgcaagggccgcgcgatccgcttcgccggcgacgac
gtgcgcgagttcacgagccgcacctccaccggcgttcgcggcatggtgctcaaggacggc
gaccgggtcatctcgctctcgatcctgcaccgcgtcggcaccgattccgaggaacgcgag
cagtatctgcgcttcgctccctggaagggcgagaaggacggcgaatccacgctgtctccg
gaacggaccgaggaactcgccaagcgcgagcagttcatcctcaccgtctgcgccaacggc
tacggcaagctgtcctcggcctacgagtaccgccgcacgggccgcggtggccaaggcatc
accaatatcgacaacatcggccgcaacggcccggtcgtcgccagcttcccggccacccag
gcgcagcagctcatgctggtcaccgaccaggccaagctgatccgcctgccgctctcctcg
ctgcgcgtcatcggccgcggctcggcgggcgtgcgcctgttcacggtgtccaacgacgaa
cacgtcgtcagcgccgtgcgcctcgacgaggagagcgaggacgaagccgtggtcgccccc
gtggtcgacgagacgccgacgcccgaaagcgacgttccgggcagcgatgctccggacggc
cacgggaccgaggacgacgcgtga
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