Novosphingobium sp. BL-52-GroH: ACFFDA_14810
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Entry
ACFFDA_14810 CDS
T11269
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFFDA_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novb03019
]
ACFFDA_14810
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACFFDA_14810
Messenger RNA biogenesis [BR:
novb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACFFDA_14810
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XKH13995
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All DBs
Position
1:457394..458566
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AA seq
390 aa
AA seq
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MADRLDVAWMHRKDLAELVAALGPGNARYVGGAVRDSLIGLPVKDIDMATVLHPETVLAR
LEAAGIRSVPTGIEHGTVTAVLPGGPVEITTLRHDVATDGRRATVAFASDWQEDAARRDF
TINALYADPLDGEIFDWFGGRADLDARHVRFIGDARQRIREDHLRILRYFRFQARFGSTP
ADDEAESACADLAATLKGLSRERVGMETMNLLGLPDPAPTVRRMAQLGVLAVILPEADPE
GLAALVAAETAQRHRPDPIRRLAALLPAKPALAEQVAARFRLSAAQKKRLSLAASREGEP
GEPRALAYQLGREPALDRLLIAGIDASALDGWDIPQLPLKGGQIVARGVGAGPEVARILH
QVVDAWIAEGFPDTARVEALLGEILAGRPA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccggctcgacgtcgcgtggatgcaccgcaaggacctcgccgaactcgtcgcc
gcgctgggccctgggaatgcccgctacgtgggcggcgccgtacgtgacagcctgatcggc
cttccggtcaaggacattgacatggcaaccgtcctccaccccgaaaccgtcctcgcgcgg
ctcgaggcggccggcatccgcagcgttcccaccgggatcgagcatggcaccgtcacggcc
gtcctgcctggcggcccggtcgagatcaccaccttgcgccatgacgtcgcgaccgacggc
cgccgcgccacggtcgccttcgccagcgactggcaggaagatgccgcgcggcgcgacttc
acgattaacgcgctctacgccgatccgctggacggcgagatcttcgactggttcggaggc
cgcgcggacctcgatgcacgccatgtacgcttcatcggcgatgcccgccagcgcatccgc
gaggaccacttgcggatcctgcgctacttccgcttccaggcgcgcttcggctccacccct
gccgacgacgaggccgagagcgcctgcgccgacctcgccgcgacgctcaagggcctatcg
cgcgagcgggtgggcatggagacgatgaacctgctcggcctgcccgaccccgcccccacg
gtgcggcgcatggcgcagctgggcgtgctggcggtgatcctgcccgaagccgatcccgag
ggccttgccgcacttgtcgccgccgagaccgcgcagcgccatcgccccgatccgatccgc
cgcctcgccgcgctgctgccggcgaaacccgcgctggcggagcaggtcgccgcccgcttc
cggctctcggcggcgcagaagaagcgtctgtcgctggcagcctcgcgagagggcgagccc
ggcgaacctcgtgcccttgcctatcaactcggccgcgagcccgcgctcgatcgcctgctg
atcgccggcatcgatgcctccgccctggatggctgggatatcccgcaactgcccctcaag
ggcggccagatcgtcgcgcgcggggtgggtgccggccccgaggtcgcccgcatcctgcac
caggtcgttgacgcctggatcgccgagggcttcccggataccgcccgggtcgaggccctg
ctcggtgaaatcctggcggggcgcccggcgtga
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