Novosphingobium sp. BL-52-GroH: ACFFDA_20850
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Entry
ACFFDA_20850 CDS
T11269
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_20850
Transporters [BR:
novb02000
]
Other transporters
Pores ion channels [TC:
1
]
ACFFDA_20850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
Motif
Other DBs
NCBI-ProteinID:
XKH15108
LinkDB
All DBs
Position
1:1716879..1717898
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AA seq
339 aa
AA seq
DB search
MRKLVLGLALASTAIATPALARDNSWYLQLDFGGMIVEDADVKVNGVSDADTIDFKKGFD
GGAVLGYDFGPFRLETEASYRQAAIKNTGGADASNLSFMVNGLLDFGPDDGLQGFVGGGA
GVARVHADLIDDSDSGFAWQAIAGIRAPLSSHWDVGLKYRFMNVDNVDLVGPAGDSISTR
WRSHSLLGTLAYNFGEPAAPPPPPPPPPPPPPPPPPPPPPPVVCNKGPYIVFFDWDKSDI
TPEASTILDSAVSAYGNCDSVPIMLAGYTDRSGTPKYNQGLSERRNSSVRSYLTSHGIPD
ASISSQAFGEANPRVPTADGVRELQNRRVEITYGPGSGM
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactcgtccttggtctggcgctggcttcgacagctatcgccacgcccgcgctt
gcgcgcgacaattcatggtatctgcaactcgacttcggcggcatgatcgtcgaagacgct
gacgtcaaagtgaacggcgttagcgacgccgacacgatcgacttcaagaagggcttcgac
ggcggcgccgttctcggctacgacttcggtcccttccgtctggaaaccgaagccagctac
cgccaggcagcgatcaagaacaccggtggcgctgatgccagcaacctgtcgttcatggtc
aacggcctgctcgacttcggtcccgacgacggcctccagggcttcgtcggcggtggtgcc
ggtgtggctcgcgtccacgccgatctcatcgacgattcggacagcggcttcgcctggcag
gcgatcgcgggtatccgtgctccgctcagctcgcactgggatgtgggcctgaagtaccgc
ttcatgaacgtcgacaacgtcgacctcgtgggcccggcaggcgattccatcagcacccgc
tggcgttcgcactcgctgctcggcaccctggcgtacaacttcggcgaaccggcagctccg
ccgccgcccccgccgccgccgccgcctcccccgccgcccccgcctccgccgcccccgccg
ccggtggtgtgcaacaagggtccgtacatcgtgttcttcgactgggataagtcggacatc
acgccggaagcctccaccattctcgacagcgccgtcagtgcctatggcaactgcgacagc
gttccgatcatgctggccggctacaccgaccgttcgggcacgcccaagtacaaccagggt
ctgtcggagcgtcgtaactcgtcggtccgttcgtacctgaccagccacggtatccccgac
gcctcgatctcgagccaggcgttcggtgaagccaacccgcgcgttcccaccgccgacggt
gtgcgcgagctgcagaaccgccgcgtcgagatcacttacggtccgggttcgggcatgtaa
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