Novosphingobium sp. BL-52-GroH: ACFFDA_21935
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Entry
ACFFDA_21935 CDS
T11269
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACFFDA_21935 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_21935 (ung)
Enzymes [BR:
novb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACFFDA_21935 (ung)
DNA repair and recombination proteins [BR:
novb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACFFDA_21935 (ung)
Prokaryotic type
ACFFDA_21935 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OpuAC
Motif
Other DBs
NCBI-ProteinID:
XKH12170
LinkDB
All DBs
Position
1:complement(1941237..1941926)
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AA seq
229 aa
AA seq
DB search
MTATQQAQSVPPSWAPALDPVLGTPEARKLGGWLKTEEAAGKRIFPPRGTRLAAFELTPL
DAVRVVILGQDPYHGAGQAHGLAFSVQAGVRVPPSLVNIYKELATDCGVTAPGHGNLEHW
ARQGVLLLNNALTVEEGQAGSHQNRGWEAVTDAAVAAVVAKREPCVFMLWGSHAKKKAMR
VSGLADSHHLVLTAPHPSPLSAYAGFFGCKHFSRANAFLAEHGRGTIDW
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacacagcaggcccaaagcgtgccccccagttgggctcccgcgctcgacccg
gtgctggggacgcccgaggcgcgcaagttgggcggctggctcaagaccgaggaagccgcc
ggcaaacgcatctttccgccgcgcggcacgcgcctcgccgcgttcgagctgaccccgctc
gacgccgtacgcgtggtgatcctggggcaggacccctaccacggcgccggacaggcccat
ggactggccttctcggtgcaggcgggggtgcgggtgccgccctctctggtgaacatctac
aaggaactggcgacggactgcggcgtgaccgctcccggccacggcaacctcgaacactgg
gcacggcagggtgtgctgctgctcaacaacgcactgacagtggaggaggggcaggccggc
tcgcaccagaaccggggctgggaagccgtgaccgacgctgccgttgccgccgtggtggcg
aagcgcgaaccttgcgttttcatgttgtggggcagccacgcgaagaagaaggcgatgcgg
gtgtcggggctggcggacagccaccacctcgtcctcacggcgccgcacccgagcccgctt
tcggcatacgcggggttcttcgggtgcaagcatttcagccgtgccaatgccttcctcgcc
gaacacgggcgcgggacgatcgactggtaa
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