Novosphingobium sp. BL-52-GroH: ACFFDA_22715
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Entry
ACFFDA_22715 CDS
T11269
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03030
DNA replication
novb03430
Mismatch repair
novb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFFDA_22715 (dnaQ)
03430 Mismatch repair
ACFFDA_22715 (dnaQ)
03440 Homologous recombination
ACFFDA_22715 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
novb03032
]
ACFFDA_22715 (dnaQ)
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_22715 (dnaQ)
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFFDA_22715 (dnaQ)
DNA replication proteins [BR:
novb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFFDA_22715 (dnaQ)
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFFDA_22715 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XKH12317
LinkDB
All DBs
Position
1:2095489..2096172
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AA seq
227 aa
AA seq
DB search
MREIIFDTETTGFDPKNGDRMVEIGCIEMVNRVTTGRTFHAYFNPERSMPAEAEAVHGLS
DTFLADKPLFAASAQDFLDFIEDSPMIAHNAGFDFNFINAELAMCGMPIVKLDRMVDTVA
LAKVRHPGAKLSLDALCSRYGIDRSHRTKHGALLDAELLAQVYVELRGGRQIGLELVAET
TKIVTEIKVLTTKDRIFRQPRPHAATEEELVAHAAFLKSVDTPLWGA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatcttcgacaccgagacgaccggatttgacccgaaaaacggggataga
atggtggaaatcggttgtatcgaaatggtcaaccgggtgaccacgggtcgcaccttccat
gcctatttcaaccccgagcgctcgatgccggccgaggccgaggcggtccacgggctgtcc
gatacgttccttgccgacaagccgctgttcgcggcgagcgcgcaggacttcctcgacttc
atcgaagacagcccgatgatcgcgcacaacgccgggttcgacttcaacttcatcaacgcc
gaactggcgatgtgcgggatgcccatcgtcaagctggaccgcatggtcgacaccgtggcc
ctcgccaaggtgcgccatcccggcgccaagctttcgctcgacgcgctgtgctcgcgctac
ggcatcgatcgcagtcaccgcaccaagcatggcgcactgctcgatgccgaactgctggcg
caagtctacgtcgagctgcgcggcggtcgccagatcggcctcgaacttgtcgcagaaacc
accaagatcgtgacggaaatcaaggttctcaccacgaaggaccgtatctttcgtcagccg
cgtccccatgcggccaccgaagaggaacttgtcgcgcacgcggcgtttctcaagtcggtc
gataccccgctctggggtgcctga
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