Novosphingobium sp. BL-52-GroH: ACFFDA_23655
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Entry
ACFFDA_23655 CDS
T11269
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFFDA_23655 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novb03019
]
ACFFDA_23655 (groL)
03110 Chaperones and folding catalysts [BR:
novb03110
]
ACFFDA_23655 (groL)
03029 Mitochondrial biogenesis [BR:
novb03029
]
ACFFDA_23655 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
novb04147
]
ACFFDA_23655 (groL)
Enzymes [BR:
novb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACFFDA_23655 (groL)
Messenger RNA biogenesis [BR:
novb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACFFDA_23655 (groL)
Chaperones and folding catalysts [BR:
novb03110
]
Heat shock proteins
HSP60 / Chaperonin
ACFFDA_23655 (groL)
Mitochondrial biogenesis [BR:
novb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACFFDA_23655 (groL)
Exosome [BR:
novb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACFFDA_23655 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACFFDA_23655 (groL)
Exosomal proteins of breast cancer cells
ACFFDA_23655 (groL)
Exosomal proteins of colorectal cancer cells
ACFFDA_23655 (groL)
Exosomal proteins of bladder cancer cells
ACFFDA_23655 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XKH12485
LinkDB
All DBs
Position
1:2275350..2276993
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVRFSRDARERILAGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGINPMDLKRGI
DLAVLKVVENLKARSTPVAGSAEIAQVGIISANGDVEVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFVTNPEKMTVELENPYILIHEKKLSSLQALLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLGDIATLTAGEM
ISEDLGIKLESVTLGMLGEAKKVTIDKDNTTIVDGAGSHDEIKARVEQIRSQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATRALDGLTGANEDQTRGIDIIRKAITAPVKQIAENAGSDGAVVAGKLLDGTDENIGFN
ASTDVYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAIVERPEDKPAMPPMGGGMG
GMGDMGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggaagtacgcttttcgcgtgacgctcgcgagcgcattctcgccggtgtc
gacatcctcgccaacgccgtcaaggtgaccctggggcccaagggccgcaacgtcgtcatc
gacaagagcttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
gccaacgacaaggccggcgacggcaccaccaccgcgaccgtcctcgcccaggcgatcgtt
cgcgaaggcatgaagtcggttgccgccggcatcaacccgatggacctcaagcgcggcatc
gacctcgccgtcctcaaggtcgtcgagaacctcaaggcgcgttcgaccccggtcgccggc
tcggccgaaatcgcccaggtcggcatcatctccgccaacggtgacgtggaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtcgaggaggcc
aagggtctcgaattcgaactcgacgtcgtcgaaggcatgcagttcgatcgcggctacctg
tcgccgtacttcgtgaccaaccccgagaagatgaccgtcgagctcgagaacccctacatc
ctcatccacgagaagaagctgtcgtcgctccaggcactgcttccgatcctggaagccgtg
gtgcagtcgggccgtccgctcctcatcatcgccgaggacatcgagggcgaggctctggcc
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgcagccgtcaaggctccgggc
ttcggcgatcgtcgcaaggccatgctgggcgacatcgccacgctgaccgctggcgagatg
atctcggaagacctcggcatcaagctcgagagcgtcacgctcggcatgcttggcgaagcc
aagaaggtcaccatcgacaaggacaataccaccatcgtcgacggtgccggttcgcatgac
gagatcaaggctcgcgtcgagcagatccgttcgcagatcgaagtcaccacttcggactac
gaccgcgaaaagctccaggagcgccttgcgaagctggccggcggcgttgccgtcatcaag
gtcggcggcgcttcggaagtcgaagtcaaggagcgcaaggaccgcgtcgacgacgccctc
cacgcgacccgcgccgcagttgaagaaggcatcgtccccggcggcggtacggctctgctg
tacgcaacgcgcgctctcgacggcctgaccggcgccaacgaagaccagacccgcggtatc
gacatcattcgcaaggcgatcaccgcgcctgtgaagcagatcgccgagaacgccggcagc
gacggcgcggttgtcgccggcaagctgctcgacggcaccgacgagaacatcggcttcaac
gcctcgaccgacgtgtacgagaacctgaaggccgccggcgtgatcgaccccaccaaggtc
gtgcgcaccgcgctgcaggacgcagcttcggttgccggcctgctcatcaccacggaagcg
gcgatcgtcgagcgccccgaggacaagcccgcgatgcccccgatgggtggcggcatgggc
ggcatgggcgacatgggcttctaa
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