Novosphingobium sp. BL-52-GroH: ACFFDA_23790
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Entry
ACFFDA_23790 CDS
T11269
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ACFFDA_23790 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
novb01007
]
ACFFDA_23790 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
novb03016
]
ACFFDA_23790 (hisS)
Enzymes [BR:
novb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
ACFFDA_23790 (hisS)
Amino acid related enzymes [BR:
novb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ACFFDA_23790 (hisS)
Transfer RNA biogenesis [BR:
novb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ACFFDA_23790 (hisS)
Prokaryotic type
ACFFDA_23790 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
tRNA-synt_2d
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
XKH12510
LinkDB
All DBs
Position
1:2301975..2303219
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AA seq
414 aa
AA seq
DB search
MNTTPQAIRGTQDIFGAEAEAFAHVVETFERVRRLYRFRRAEMPVFEKTAVFSRSLGETT
DVVSKEMYSFEDRGGDSLTLRPEFTAGIARAYLTDGWKQFAPLKVATHGPLFRYERPQKG
RYRQFHQIDAEVIGAAEPMADVELLVMADQLLKELGISEGVTLQLNTLGDGASRDAWRAA
LVEYFRDHRQALSEDSQDRLERNPLRILDSKDPRDKPFTADAPRIDDFLSAEAQDFFAAV
TQGLEAASVDFVRAPALVRGLDYYRHTAFEFVTDRLGAQGTVLGGGRYDGLMVALGGPET
PAVGWAAGIERLAMLVADAGGAAEPTLTAILAVEDDAALPFALKAITALRHQGIDAEMIA
TGSPRKRFDKAVKSGAKVLVSFGIKDGVPVANLRAGDTTPARLAVEQVMVSIQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccactcctcaagccattcgcggaacccaggacatcttcggcgccgaggccgag
gccttcgcccacgtcgtcgagaccttcgagcgcgtgcgccggctctatcgcttccgccgc
gcggagatgccggtcttcgagaagaccgccgtattctcgcgctcgctgggcgagacgacc
gatgtggtttccaaggagatgtactcgttcgaggaccgcggcggcgattcgctgactctg
cggcccgagttcaccgccggcatcgcccgcgcctacctgaccgacggctggaagcagttc
gcgccgctcaaggtcgcgacccacggcccgctgttccgctacgagcgtccgcagaagggc
cgctaccgccagttccaccagatcgacgccgaagtgatcggcgcggccgagccgatggcc
gacgtcgaactgctggtgatggccgaccagttgctcaaggaactcggcatttccgaaggc
gtgacgctgcagctcaacaccctgggcgacggcgccagccgcgacgcctggcgcgccgcg
ctggtcgagtatttccgcgaccacaggcaagcattgagcgaggattcgcaggaccggctg
gagcgcaatcccttgcgcatcctcgattccaaggacccgcgcgacaagcccttcaccgcc
gacgcgcccaggatcgacgatttcctctcggctgaggcgcaggacttcttcgctgcggtg
acccagggcctcgaagcggcctcggtggacttcgtgcgcgccccggccctcgtgcgcggg
ctcgactactatcgccacaccgccttcgaattcgtgaccgaccggcttggcgcgcagggc
accgtcctcggcggcggccgctacgacgggctgatggtcgcgctgggcggtcccgagacc
ccggcggtcggctgggcggcggggatcgagcggctggcgatgctggtcgccgatgccggc
ggcgccgccgaacccacgctcaccgcgatcctcgcggtcgaggacgacgcggcgctgcct
ttcgcgctcaaggccatcaccgcgctgcgccaccagggcatcgacgccgagatgatcgcc
accggcagcccccgaaagcgcttcgacaaggcggtgaagtcgggggccaaggtgcttgtc
tcgttcggaatcaaggacggcgtgcccgtcgccaacttgcgcgctggcgataccacgcct
gcacgcctggcggtggagcaggtgatggtgtcgatccagccgtga
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