Novosphingobium sp. BL-52-GroH: ACFFDA_23935
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Entry
ACFFDA_23935 CDS
T11269
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb01501
beta-Lactam resistance
novb02010
ABC transporters
novb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ACFFDA_23935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACFFDA_23935
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACFFDA_23935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
novb02000
]
ACFFDA_23935
Transporters [BR:
novb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ACFFDA_23935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XKH15253
LinkDB
All DBs
Position
1:2329120..2330643
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AA seq
507 aa
AA seq
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MLSKRPEAVSAKRSPVAAFRLVVLLAGLTLASCSSYDNSAIDVAVVGNAGDPFEEGTRLA
PAGQLVRAATAEGLVAFDEAGRVIPALADRWIVTDDGQSYIFRLREGNWPDGDPLTADSA
RKAIRATLKDLADTPLALDLGGIDEVRAMAGRVIEIRLNRPMPYLLQLLAQPELGLDHDG
RGAGPMTVTRSGKVAALTRIEPSRLGLPIIENWAQRTRKVQLHALPGPAAIEAFNEGQVD
LVLGGQIQDFMLTRSVGILRGTIQLDPVIGLFGLQVMRDKGFLADPANREALAMAIDRPA
LIAPFGVGGWSPTTRIVTPSLDGDLGTIGERWGEQSLEDRRAVAAARVRGWLAGQGGGAP
GTPVALHVWLPEGGGSRLLFDRLLADFATIGVRLEKAANADGADLALVDDVARYPRAAWF
LNRLSCRARRGLCSPEADARVAEAAIAPSPAERAALLTEAEAELTATNVFIPFGTPIRWS
LVRGSVDGFATNAWGWHPLMPLSWLPK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctctccaagcgcccagaggccgtttcggcaaagcggagcccggtcgcggcgttccgg
ctcgtggtcctgctggccggcctgacgcttgcttcgtgcagttcctacgacaattcggcg
atcgacgtggcggtggtgggcaatgccggcgatccgttcgaggaaggcacccgcctcgcg
cccgccgggcaactggtgcgcgccgcgacggccgaaggtctggtcgccttcgacgaagcc
ggacgggtgatccccgcgctcgccgaccgctggatcgtcaccgacgacggccagagctac
atcttccgcctgcgcgaggggaactggccggacggcgacccgctgactgccgattcggcg
cgcaaggcgatccgggccacgctcaaggaccttgccgacacgccgctcgcgctcgacctc
ggcggcatcgacgaagtgcgggccatggccggccgggtgatcgagatccggctgaaccgg
ccgatgccctatctgctgcaactgctcgcccagcccgaactgggtctcgaccatgacggc
cggggggccgggccgatgacggtgacgcgcagcggcaaggtcgccgcgctcacccgcatc
gaaccctcgcgcctcgggttgcccatcatcgagaactgggcgcagcgcactcgcaaggta
cagctccacgccctgcccgggcccgccgcgatcgaggcgttcaacgaaggccaggtcgac
ctcgtgctcggcggacagatccaggacttcatgctgacccgctcggtcggcatcctgcgc
ggcaccatccagctcgacccggtgatcggcctgttcggcctgcaggtgatgcgcgacaag
ggcttcctggccgaccccgccaaccgcgaggccctggccatggccatcgaccgccccgcg
ctgatcgccccgttcggcgtcggcggctggtcgccgacgacccggatcgtgacgcccagc
ctcgatggcgacctcggcaccatcggcgagcgctggggcgagcagtcgctcgaggaccgg
cgcgcggtggcggcggctcgggtgcgcggctggcttgcggggcaggggggcggggcgccc
ggcacgcccgtcgccttgcatgtctggctgcccgagggcggcggctcgcggttgctgttc
gaccgtctcctggccgatttcgcgaccatcggcgtgcggctggagaaagccgcgaacgcg
gacggcgcggaccttgcgctggtcgacgacgtcgcccgctatccgcgcgcggcctggttc
ctcaaccgcctctcgtgccgggcccggcgcggcctgtgttcgcccgaggccgatgcgcgc
gtcgccgaggccgccatcgcgccgagcccggccgagcgggccgcgctgctgaccgaggcg
gaagcagaactcaccgccaccaacgtgttcattcccttcggcacgccgatccgctggtcg
ctggtgcgcggcagcgtcgacggcttcgcgacgaacgcgtggggctggcatcccttgatg
ccgctctcctggctccccaagtag
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