Novosphingobium sp. BL-52-GroH: ACFFDA_25075
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Entry
ACFFDA_25075 CDS
T11269
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
novb03000
]
ACFFDA_25075
Transcription factors [BR:
novb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ACFFDA_25075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
MarR
TrmB
IclR_C
HTH_11
PCI
MarR_2
GntR
Rrf2
DUF977
HTH_PafC
DUF4423
HTH_Cmi2_C
GAF_2
HTH_28
HTH_24
Dimerisation
HTH_Crp_2
EAP30
Motif
Other DBs
NCBI-ProteinID:
XKH12751
LinkDB
All DBs
Position
1:complement(2578617..2579417)
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AA seq
266 aa
AA seq
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MERTQELKSLKRGLRAVALINTMGSITIAELARQFQVPRTTAERVLMTLLSEGFVERDRT
TKAFYLTAQVHSLSDGYAEENLLVKSARPILFETTREIGWPLCLALPLGEFMTVRLTTDS
ETTLNLNRRFIGTVGPMAMVSSGLAFLGFLDDRQRTIMIEMLQRSEDPLQAAAKDMDRMR
YLLDNVRSTGYSFGLDLGRERSVAVPVMSGGRVRGAIFMAFMARALTNEQVISQFVPRLK
DIARRIEAALDATTDRGAAGPAVHDA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcacccaggagttgaaatcattgaagcgcggcctgcgtgcggtcgcgctcatc
aacaccatgggctcgatcacgatcgccgaactggcacgccagttccaggtgccgcgcacc
accgccgaacgcgtgctcatgaccctgctgagcgaaggcttcgtcgagcgcgaccgcacg
accaaggccttctacctcaccgcgcaggtccattcgctgtcggacggctatgccgaggaa
aacctgctggtgaagtcggcccggccgatcctgttcgagaccacgcgcgaaatcggctgg
cccttgtgcctcgccctgccgctgggcgagttcatgacggtccgcctgacgacggattcg
gaaacgacgctcaacctcaaccgccgcttcatcggtaccgtgggcccgatggccatggtc
agcagcggcctcgccttcctcggcttcctcgacgaccgccagcgcacgatcatgatcgag
atgctccagcgctccgaagacccgctgcaggccgccgccaaggacatggaccggatgcgc
tacctgctcgataacgtgcgcagcaccggctacagcttcggcctcgacctgggccgcgag
cgcagtgtcgcggtgccggtgatgtcgggcgggcgcgtgcgcggtgcgatcttcatggcg
ttcatggcgcgggccctgaccaacgagcaggtcatcagccagttcgtcccccgcctcaag
gacatcgcccggcgcatcgaagccgccctcgatgcgacgacggatcgcggggctgcgggg
ccggccgtccacgacgcctga
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