Novosphingobium sp. BL-52-GroH: ACFFDA_25175
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Entry
ACFFDA_25175 CDS
T11269
Name
(GenBank) autotransporter domain-containing protein
Organism
novb Novosphingobium sp. BL-52-GroH
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
XKH12770
LinkDB
All DBs
Position
1:2603346..2606501
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AA seq
1051 aa
AA seq
DB search
MSSLHTTSSLGALVLALVSGPALADTTISGDTTTALSTSTAGAITVKAAGEIALDSGTAI
TVDNDSTVTMNGTIEMGDADNAKAISIASGTTSTVTVGDDAVIKVLEDYSVDDDDDDSIV
TTGIASATDRAAISTTGDASGTILNEGAISVEGQNSGGIVLGGKWTGDITNSGTISVIGD
YATGISTQAVDGNVTVEGNVSAVGYGASAISVAGDVSGALTIQGSVTKGYSYSNQDGDTM
VLSRAALRTGTAAVSVTGSVDGGIYIAAPPVDDDSDSDDIDGDGVDDSDEGTGVITSYGN
GAGLQIGGTTDTTIGAVAANVGTYSLAIEGSITANSYYSNTNAYGVIIGGQGGNVTLTDG
IGVSGTLSAISYDTSATALLINKGSTVNNLYNSGTITASLSSAGEGTTVAIQDLSGTLTS
ITNTGYITANGSSTDSRTALDLSANTTGVTITQYLNDADAETRADYVEDNDEDDPTVYAK
IYGDILTGSGNDTITSSTGEIEGDTYFGAGNDTLSLSDDATYTGDVYFGAGTGTASLSGT
SVYSGTMDFAGEAGTVTINDTATYSGKFTNAGNLAVTVNGGTLIPDEATTVAFDTLTVGS
SGTIGVFVDGDESSTLVVNHATLANGASVSATVNSLATAEGTYTVLTSDDLTIDGSLTSS
VDTPFLYNGSVTSDDSNVYLTLARKTTDELGLTKSQAAAWDAIYSTAQNDDDMTDSLLQV
EDSATLRTQTASLLPDHAGGVFKAVTMGDRLAARHISEDTSMFEISDVGGWLEPVYWRAS
KEATGTASYKASGWGLSAGFERHTDLGYFGVSYAWLKSTVKDNGGTGNLDIGQHDFGAFW
RTAKGPLMAWARVGASRISIDSTRTYTGTIDDTDFTYDADGSWKGWLFSGLVGASYKFDM
SRRFSLKPKLELEQMWLKESSYDETADSDAIALSVASRTSKALTATPTVTASYSLGAISP
DWRPLTFSFEGGRREVLTGKLGNTTAYFNGGDSYDAGEAFTIVGDSLKGAWVGEASVLAG
GYDFTWKIATRMEKTSTSSDKSIRASLSVAF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttgcacaccacttccagcctgggcgccctggtgctcgccctcgtttccggc
ccggcgctggccgacaccaccatatcgggcgacaccaccaccgcgctgtcgacgtcgacc
gcgggcgccatcaccgtcaaggcagccggggaaatcgcgctcgacagcggcaccgcgatc
accgtcgacaacgattccaccgtgacgatgaacggcacgatcgagatgggcgatgccgac
aacgccaaggccatctcgatcgcttcgggcaccacctccaccgtgacggtcggcgacgac
gcggtcatcaaggtcctggaagactacagcgtcgacgatgacgacgacgattccatcgtc
accaccggcatcgcctcggcgacggaccgcgccgccatctccacgacgggcgacgcttcg
ggcacgatcctcaacgaaggcgcgatctcggtcgaaggccagaactcgggtggcatcgtg
ctcggtggcaagtggaccggcgacatcaccaactccggcacgatcagcgtcatcggcgac
tatgcgaccggcatctcgacgcaggccgtggacggcaacgtcacggtcgagggcaacgtc
tcggcggtcggctacggggccagcgctatcagcgtggccggcgacgtcagcggcgcgctg
accatccagggcagcgtgaccaagggctattcgtatagcaaccaggacggcgacacgatg
gtcctgtcgcgcgcggcgctgcgcacgggcaccgcggcggtctcggtcaccggcagtgtc
gacggaggcatctacatcgccgcgcctccggtcgacgacgattcggactccgacgacatc
gacggcgacggcgtcgacgacagcgacgagggcaccggcgtcatcacttcctacggcaat
ggcgcggggctgcagatcggcgggaccaccgacaccacgatcggcgcggtcgccgccaac
gtcggtacgtattcgctggcgatcgagggctcgatcaccgcgaactcgtactacagcaac
accaatgcctatggcgtcatcatcggcgggcagggcggcaacgtgacgctgaccgacggc
atcggcgtgtcgggcacgctgtcggcgatctcctacgacacgtccgccacggcactgctc
atcaacaagggcagcacggtcaacaacctctacaacagcggcaccataaccgcctcgctc
agctcggcgggcgaaggcacgacggtggccatccaggacctgtccggcaccctgacctcg
atcaccaacaccggctacatcaccgccaacggatcgagcaccgacagccgtaccgcgctc
gacctctcggccaacaccaccggcgtgaccatcacccagtacctcaacgacgccgacgcc
gagacccgcgccgactacgtcgaggacaacgacgaggacgatcccaccgtctacgccaag
atctacggcgacatcctcaccggatcgggcaacgacacgatcacctcgtcgaccggcgaa
atcgagggcgacacctacttcggcgccggcaacgacaccctgtcgctgtcggacgacgcc
acctacaccggcgacgtctacttcggcgccggcaccggcactgccagcctgtcgggcacg
tcggtctattccggcacgatggacttcgcgggcgaggccggcaccgtcaccatcaacgat
accgcgacctactcgggcaagttcaccaatgccgggaacctggccgtcaccgtcaacggc
ggcacgctgatccccgacgaggcgaccaccgtcgccttcgacaccctgaccgtcggttcg
tccggcacgatcggcgtcttcgtcgacggcgacgaaagctcgaccctggtggtcaaccac
gccacgctggcgaacggcgccagcgtcagcgcgaccgtgaacagcctcgccacggcggaa
ggcacctacaccgtgctgacctcggacgacctgaccatcgacggctcgctcacctcgtcg
gtcgacacgccattcctctacaacggctcggtcaccagcgacgacagcaacgtctatctg
acgctggcccgcaagacgaccgacgaactgggcctgaccaagtcgcaggccgccgcctgg
gacgcgatctattcgaccgcgcagaacgacgacgacatgaccgacagcctgcttcaggtc
gaggattcggcgaccctgcgcacccagacggcctcgctgctgcccgatcacgcgggcggc
gtgttcaaggccgtgacgatgggcgaccgcctcgccgcgcgccatatcagcgaggacacc
tcgatgttcgagatttccgacgtcggcggctggctcgagccggtctactggcgcgccagc
aaggaggcgaccggcaccgccagctacaaggccagcggctggggcctctcggccggcttc
gagcggcacaccgacctcgggtacttcggcgtgtcctacgcctggctgaaaagcacggtg
aaggacaacggcggcaccggaaacctcgacatcggccagcacgacttcggcgccttctgg
cgcaccgccaagggccccctgatggcctgggcgcgcgtgggtgcctcgcgcatctcgatc
gattcgacgcgcacctacaccggcaccatcgacgacaccgacttcacctacgacgccgac
ggcagctggaagggctggctgttctcggggctcgtgggcgcgagctacaagttcgacatg
tcgcgccgcttcagcctcaagccgaagctggagctggagcagatgtggctgaaggagagc
agctacgacgagaccgccgacagcgacgccatcgccctctccgtcgccagtcgtaccagc
aaggccttgaccgcgacgccgaccgtcaccgcctcgtactcactgggtgcgatctcgccc
gactggcgcccgctcactttctcgttcgagggcgggcggcgcgaagtgctgaccggcaag
ctgggcaacaccaccgcgtacttcaacggcggcgacagctacgatgcgggcgaggccttc
accatcgtcggcgacagcctcaagggggcctgggtcggcgaggccagcgtgctggcgggc
ggctacgacttcacctggaagatcgccacgcgcatggaaaagaccagcaccagctccgac
aagtcgatccgggcttcgttgagcgtggcgttttga
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