Novosphingobium sp. BL-52-GroH: ACFFDA_27970
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Entry
ACFFDA_27970 CDS
T11269
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
novb03009
]
ACFFDA_27970 (der)
Ribosome biogenesis [BR:
novb03009
]
Prokaryotic type
GTPases
ACFFDA_27970 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
Roc
Ras
RsgA_GTPase
Arf
ABC_tran
DUF5906
AAA_24
SRPRB
GBP
Motif
Other DBs
NCBI-ProteinID:
XKH13282
LinkDB
All DBs
Position
1:3180713..3182092
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AA seq
459 aa
AA seq
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MLPQVIIIGRPNVGKSTMFNRLVGKKLALVDDQPGVTRDRRFGDAELLGLKFQIVDTAGW
EDDEAETLPGRMRKQTEASLETADVALFVVDARAGLTPLDEEIGQWLRSSPVPVILLANK
AEGRAGEGGVLEAYSLGLGDPIPFSAEHGIGVSDLFEALLPHLDPLQPIEPEFEEEMDDE
SRLLAPLKLAIVGRPNAGKSTLINRILGEDRLLTGPEAGITRDSITVEWEWTDPKTQNVR
QVRLIDTAGMRKRANVVEKLERMAVADARLAIDFAEVVVLLLDATRGLEHQDLTIASKVL
EEGRALIIAINKWDVAEGASGLFNGIRAALDEGLAQVRGVPLLAVSARTGKGLDELIAAG
FSIREAWSKRVPTAALNRWFDDALSANPPPAPGGKRIKLRYITQAKTRPPGFVVFGTRLD
LLPESYKRYLINGMRKNLGFESVPIRLNLRSAKNPFAKD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccaagtcatcatcatcggtcgacccaacgtcggcaaatccaccatgttcaat
cgcctggtcggcaagaagctcgcgctggtcgacgaccagcccggcgtcacccgcgaccgg
cgcttcggcgacgccgagctgctcggcctcaagttccagatcgtcgacactgccggctgg
gaggacgacgaggccgaaaccctgccgggccggatgcgcaagcagaccgaggcctcgctg
gaaacggcggacgtcgcgctgttcgtggtcgacgcccgcgccggcctcaccccgctcgac
gaggagatcggccagtggctgcggtcctcgccggtgccggtgatcctgctcgccaacaag
gccgaaggccgcgcgggcgagggcggcgtgctggaagcctattcgctgggcctgggcgat
ccgattcccttttccgccgagcacggcatcggcgtgtccgacctgttcgaggccctgctg
ccccatctcgaccccctccagccgatcgagccggagttcgaggaggagatggacgacgaa
tcgcggctgctcgccccgctcaagctggcgatcgtcggtcgtcccaacgccggcaagtcg
accctcatcaatcgcatcctgggcgaagaccgcctgctcaccgggccggaagcgggtatc
acccgcgattcgatcacggtcgagtgggaatggaccgaccccaagacgcagaacgtccgc
caggtccgcctgatcgacaccgccgggatgcgcaagcgcgccaacgtggtcgagaagctg
gagcgcatggccgtcgccgacgcgcgcctggcgatcgacttcgccgaagtggtcgtgctg
ctgctcgatgcgactcgcgggctcgagcaccaggacctcacgatcgcctcgaaagtgctc
gaggaaggccgtgcgctcatcatcgcgatcaacaagtgggacgtggccgaaggcgcctcg
ggcctgttcaacggcatccgcgccgcgctcgacgaagggctcgcccaggttcgcggcgtg
ccgctgctggcggtgtcggcgcggaccggcaagggactggacgaactgatcgccgccggc
ttctcgattcgcgaggcctggagcaagcgcgttcccaccgccgcgctcaatcgctggttc
gacgatgcgctttcggccaacccgccgccggcgccgggcggcaagcgcatcaagctgcgc
tacatcacccaggccaagacccgcccgccgggcttcgtggtgttcggcacccgcctcgac
ctgctgcccgagagctacaagcggtatctcatcaacgggatgcgcaagaacctgggcttc
gaatcggtgccgatccgcctcaacttgcgcagcgccaagaacccgttcgccaaggactga
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