Novosphingobium sp. BL-52-GroH: ACFFDA_28105
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Entry
ACFFDA_28105 CDS
T11269
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00052
Galactose metabolism
novb00511
Other glycan degradation
novb00600
Sphingolipid metabolism
novb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
ACFFDA_28105
09103 Lipid metabolism
00600 Sphingolipid metabolism
ACFFDA_28105
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
ACFFDA_28105
Enzymes [BR:
novb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
ACFFDA_28105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
SoxY
Motif
Other DBs
NCBI-ProteinID:
XKH13307
LinkDB
All DBs
Position
1:complement(3209242..3212553)
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AA seq
1103 aa
AA seq
DB search
MKSIRLRNRSCAVHASRISVILAASLWANGALPQVAMPIQPQVSPERPDWENPGVNAAGK
LPARSSGFPFENRALALDGDPKKSARYLDLDGDWRFAFVENADLRPLDFWHDKFDVSAWK
TIPVPSDWQAHGYGQAKYNNITYPFPANRPLIQHDINAVGSYRRDFVLPSNWTKNSTIVL
HVGAAGSAYYIWVNGRKVGYSEDSKLPSEFDVTPFVRVGKNNVSIQVFRWSDGSYLEDQD
FWRVSGIERSVYLVAEPQLRLLDTSVRAGLERRYVDGQLTVDFRVASGRPATVRVVLLDG
QQVVWSRSQRLGAKMAARKATIAATIPQVRRWTAETPNLYTLVTELLDENDNPLQSTARR
IGFRTVEIKDGQVMVNGQPITIRGVNRHEHDPATFHVISEASMRRDIEMMKRNNVNAVRT
SHYPNAELWYDLADEYGLYVMDEANVESHAYMEAGDKAPGNTQAARELYQIGYDPAWEQA
HVDRAVNMVLRDRNHPSVLFWSLGNEAGTGPNFEKAAATVRKADPTRLVSYLGHGMLGLE
HKVNDYVDIYAPMYDTLWKMQAYATDPTHKQPMIQSEYAHMQGNSGGDLQDYWDVIYKHP
KLQGGFIWDWVDQGMNGVDKNGRFFWKMGGDYGPNPGGDIEFGDGLIHADRRPNPHFFEM
RKVYQPISFRSDNPGSGIVTLINRHDFQDLSGYELSWQLLEDGRSLAQGAIANPGIAARA
SGQIAIPLPSRDVGNDKERSLIIIARAKLGAIPLVSEGTVMAWEQFALDSPSPATTSPAV
PSTSTVSVSRDAQRYILTAAGTELAVNSGSGLLDGLSFNGRQVLRGGMPNFYRPVTDNDI
GAQVPVTHVVWAMMSKSRMVKTVAVQKSEDGSATISISYDLGAGAVDFATRYRMDGAGHV
TVTVTFMPLRDTLPDPLRVGLYFSAPSDFHRLLWFGRGPQESYADRKTGAPEARWSGLIA
EQNHDYMRPMETGNKSNVRWIEIADDLGRGFRIAGTTPLSTNVLAFPYEDLDRRDPGTWR
SSDIHPREHVSVLVDAAQVGVGGDTAWSEEARAHGKYRIPVAPLNYSFTIAPSQLQTGSG
ANTLLELLGPEIPSPAGDPSFPR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtcaatccgtttgcgaaatcgatcctgcgcggttcatgcttcacggatctcggtt
atccttgctgcgtccttatgggccaatggcgcattgccgcaggtggcgatgccaatacag
ccccaggtcagtcccgaacgcccagattgggaaaatccaggggttaacgccgctggcaag
ctgcccgcacgcagttccggctttcctttcgaaaaccgcgccttggcgttggacggcgat
ccgaagaagtccgcacggtatctagatctggacggcgattggcgatttgcgttcgttgaa
aacgcggacctacgaccgctcgatttctggcacgacaaattcgacgtttccgcatggaaa
acgatccctgtgccctctgactggcaggcacatgggtatggacaagcgaaatataacaac
attacctaccccttccccgcaaatcgcccgctgattcaacacgacatcaacgccgtcggg
tcgtatcgccgtgactttgtgctgccgtcaaactggacgaaaaacagcactatagttctc
cacgtcggcgcagcgggctcagcctattatatctgggtcaatggccggaaagttggttac
tctgaagattccaagctgccatcggaattcgacgtcactccattcgtacgcgtcggcaag
aacaatgtatccatccaagtctttcgatggtctgatggcagttacctggaagatcaggat
ttttggcgcgtcagtggcatcgagcgaagcgtctatctcgtagccgaaccacagcttcgg
ctgctcgacacgtcggtgcgcgccgggctcgagcgcagatatgtggatggccagctaacc
gtcgacttccgcgttgcttcgggtcgccccgcgacagttcgggtcgtattgctggatggg
cagcaagtcgtctggtccagaagtcagcgtctgggggctaagatggccgctcgcaaggcg
acgatagcggcgactattcctcaagtcaggcgatggacggcggaaacgccgaatctatat
acgctggttaccgaactgctcgatgaaaatgataatcccctccagtcgaccgcgcgccgg
atcggcttcaggacggtcgagatcaaagacgggcaagtcatggtcaacgggcagccgatc
acgatccgcggtgtcaaccggcacgaacacgacccggcgacattccatgtcatatcggag
gcgagcatgcggcgcgacatcgagatgatgaagcgcaacaacgttaacgccgtgcgcacg
tcgcattacccgaacgccgagttgtggtacgatcttgccgacgaatatgggctgtacgtg
atggacgaagccaacgtcgagagtcatgcctatatggaagcgggggacaaggcacccggc
aatactcaagccgcgcgcgaactctaccagattggctatgacccagcctgggagcaggcc
catgttgatcgggcggtgaatatggtcctgcgcgaccgcaatcacccttcggtgctgttc
tggtcgctgggcaacgaagcgggaacagggccgaatttcgaaaaagccgcggcaactgta
cgcaaagctgacccgacgcggctggtaagctatcttggccacggcatgctgggccttgaa
cacaaggtcaacgattacgtcgacatctacgccccgatgtatgacacgctttggaagatg
caagcgtacgccacggatccgacccataagcaaccaatgatccagtccgagtacgcccat
atgcaaggaaacagcggcggcgacctgcaggactattgggacgtgatctacaaacatccc
aagctgcagggcgggttcatctgggactgggtcgaccagggaatgaatggggtggacaag
aacggccgtttcttctggaagatgggtggggattatgggccaaaccctggtggtgacatc
gaatttggcgatggccttattcacgctgatcgccgtccaaacccgcacttcttcgagatg
cgtaaggtttatcagccgatctcgtttcgctcggacaatccgggaagcggcatcgttact
ctcatcaaccgccacgatttccaggacctgagcggctatgagctgtcctggcagctgctc
gaggacggccgttcccttgcgcaaggtgcaatcgccaacccgggaattgcggctcgagct
tcggggcagatcgcgatcccgctgccatctagggacgtcggcaacgacaaggaacgctct
ctcatcatcattgcccgcgctaagcttggggccatccccctggtcagtgagggaactgtg
atggcgtgggagcagttcgcactggacagcccaagcccagccaccacgagtcccgccgtc
ccttcgacctcaacagtctcggtatcgcgtgatgcgcaacgctacattttaacggcggcc
gggacggaacttgcggtaaactccgggtcggggcttcttgacgggctctcgtttaacggc
cggcaagttctgcgcggaggcatgcctaatttctatcgccctgtcaccgacaacgatatc
ggggcacaggtcccggtaacacatgtcgtctgggctatgatgagcaaaagccgcatggtg
aagaccgtagcagtacagaagtccgaagacggcagcgcgactattagcattagctatgat
ctgggcgcgggagcggtcgacttcgccacgcgataccgaatggatggcgcagggcacgtg
acggtgacggtcactttcatgccactacgtgacacacttccggacccgttacgcgtgggc
ctgtatttttcagccccatcagattttcaccggctgctgtggttcggccggggcccccag
gagagctacgcagatcgaaaaacaggcgctccggaggcgcgctggtctgggctaattgcc
gagcagaatcacgactatatgcgaccgatggaaacgggaaacaaaagcaacgtcaggtgg
atcgaaatcgcagacgacctgggacgaggatttcgcattgccggtacaacgccactttcc
accaatgtccttgcctttccctacgaagatttggatcgcagagatccggggacttggcgc
agttcagacatacaccctcgcgaacatgtttccgtgttggtcgatgcagcccaggtcggc
gtcggaggagacacagcctggagcgaggaagcacgggctcacggcaagtatcgtatacct
gttgctccgctgaattacagcttcacgatcgcgccctcgcagctgcaaactggaagcgga
gccaataccctattggaattattggggccggaaatccccagccctgccggcgacccgtct
ttcccccgataa
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