Novosphingobium sp. BL-52-GroH: ACFFDA_28125
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Entry
ACFFDA_28125 CDS
T11269
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
novb01002
]
ACFFDA_28125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
ACFFDA_28125
Peptidases and inhibitors [BR:
novb01002
]
Cysteine peptidases
Family C82
ACFFDA_28125
Peptidoglycan biosynthesis and degradation proteins [BR:
novb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ACFFDA_28125
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
XKH13311
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Position
1:complement(3219908..3221041)
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AA seq
377 aa
AA seq
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MKIWSLPLFAVLLSAASPPPHWSNMQVSRLLTLMERSSDEGLAEATEDVPRLKQALALGD
ADTTDALATRMAEDLLGDYIGGCCNAALRSNWHIANGYEKFDQRGAIASAVRDDGLDALF
ARARPSHPFYSALRAAYRGETDPVRRNTLAANLDRWRWMPRDPGARYLLVNAAAFEATLW
QGGAMIGRWAVVVGKTRSPTPVFSARVTGVVLNPWWEIPPAIARESIAGLLSRDPAEAAR
RGYVRAGQRYRQRPGANNALGRMKLVMPNPYNVYLHDTPAQSLFEQDVRAFSHGCVRVGD
ALGLAATLLGKPHSRSRLGTLVAQGQTQTLSLPAPIPVYVTYFTAEPDGAGGVRYFPDVY
RRDVKAQAPSPEGTCPR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatggtccctgcccttgttcgcagtgcttctgtcggccgcgtcgccgccgcca
cattggtccaatatgcaagtgagccgccttctcacgctcatggaacgctcctcggatgag
gggctcgccgaagcaacggaagacgtgccccgcctgaaacaggccttggcgctcggcgac
gcggacacgacggacgcgctcgccacccgaatggccgaggacctccttggcgactacatc
ggcggctgttgcaacgcggcgctccggtccaactggcatattgccaacggatacgagaag
ttcgaccagcggggcgccatagccagcgcggtgcgcgacgatggcctggacgccctcttt
gcccgtgcgcgtccgtcgcatcccttttattccgcgctgcgcgcggcgtaccgcggtgaa
actgatccagttcgccgaaacacgctcgccgccaatctcgaccgatggagatggatgcct
cgcgacccgggcgcgcgctacctcctggtgaatgcagcggccttcgaggcgacgctatgg
cagggcggagccatgattggccgctgggccgtagtcgtgggaaagaccagatcgccaact
ccggtcttttcggcgcgagtaaccggcgttgtcctcaatccctggtgggagattcctcca
gccatcgctcgggagagcatcgctggccttctctcccgtgatccggcggaagccgcgcgc
cgaggttatgtccgcgccgggcagcgctaccgtcagcgccccggggcgaacaacgcgttg
ggccgcatgaaactcgtcatgcccaacccctacaacgtctatctccatgacacgcccgcc
caaagcctgttcgagcaggacgtccgcgccttcagccatggctgcgttcgcgtgggcgac
gccttgggtttggcagcaaccctcctgggcaagccccattctcgttcgaggctgggcacg
ctggttgcgcaaggtcagacacagacgctcagtctgccggcaccgatccctgtgtacgta
acctactttacggccgaaccagacggtgctggaggcgtgcggtatttccccgacgtctat
cgtcgcgacgtgaaggcccaggcgccaagcccagaaggaacttgcccgcgatag
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