Novosphingobium sp. BL-52-GroH: ACFFDA_28150
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Entry
ACFFDA_28150 CDS
T11269
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACFFDA_28150
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
novb01001
]
ACFFDA_28150
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
novb02022
]
ACFFDA_28150
Enzymes [BR:
novb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
ACFFDA_28150
Protein kinases [BR:
novb01001
]
Histidine kinases
LuxR family [OT]
ACFFDA_28150
Two-component system [BR:
novb02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
ACFFDA_28150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
HATPase_c
PAS_4
HisKA
DUF4118
PAS_3
PAS_8
Diguanyl_cycl_sensor
HATPase_c_5
HATPase_c_2
Phage_holin_2
MAPKK1_Int
Motif
Other DBs
NCBI-ProteinID:
XKH13316
LinkDB
All DBs
Position
1:complement(3223109..3225064)
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AA seq
651 aa
AA seq
DB search
MRTVTHRYDISSCAARVVEGMEAVLAMPAWERSPVGRYGLAVGSLMLTAAGRWALHPWLG
ERAAYLPFALVVLVAIVLCGPGPAILASLGALAFGFYFSGPADFSAGDQLEAATFAITSL
GIILLAGNISRLRHQAIDSERKSLARTQDALDVAEELNLLIDGATRQAIYMLDPRGFVTI
WNQGAERLKGWSEAEALGQHTSVFYPADARIAGKPEADLDRARNEGRFEEECWRLRKDGS
EFLASLSLTALKDEQGHLRGFAKIVSDITDSRAAEDTIRAREEHLASILSTVPDAMVVID
HKGVILSFSSAAQALFGYTEDEIVGCNVSTLMPSPDREHHDGYIRRYLETGEKRIIGIGR
IVFAQRKDGSTFPMELSIGEAKSRSQRIFTGFIRDLTDRRRTEERLQSLQSELIHVSRVS
AMGTMASTLAHELNQPIAAIANYVEAVRDQLLDPRDEDLPMMREALDDAAKDALRAGQIV
RRLRDFVARGEVERSVEELPALIKDASVLGLMGAREHGIEATFELDPSASPVLVDRVQIQ
QVLINLLRNAGEAMSDSPERRVHVTSSPDRGGLVRVSVADTGPGVAKEIAEQLFSAFTSS
KPQGMGLGLSICRTIIEANGGRIWMEPRPEGGTIFHFTLQRAQTGNEHEQQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacagtcacccaccgctatgacatctcgtcctgtgcggcccgagtggttgaaggg
atggaggccgtgcttgcgatgccggcttgggagcgatcacctgtcgggcgttacggtctg
gctgtgggcagcctgatgctcacggcggcaggacgctgggcccttcacccctggcttggc
gagcgagctgcctaccttcctttcgcgttggtggtcctcgtcgcgatcgtgctatgcggc
ccaggtcccgccattctggcaagtctgggcgcattggcatttggattctacttttcgggt
cccgccgacttcagtgccggcgaccagctggaagctgcgacgttcgcgatcacgtcactc
ggcattattctccttgcggggaatatcagccgcctccggcaccaagcaatcgacagcgag
cgcaaatcgctagcccgcacccaggacgccctcgacgtcgcggaagaactcaacctattg
atcgacggcgcgacccgccaagcgatctacatgctcgatccacgcggcttcgttaccatc
tggaaccagggagccgagcgcctgaagggctggagcgaagccgaggcgctgggacagcac
acttctgtcttctatcctgctgatgcgcgaatagccggcaaaccggaggcggatctcgac
cgagcgcggaacgaggggcgcttcgaggaagagtgctggcgccttcggaaagacggaagc
gagtttctcgcatccctttcactcaccgccctgaaagacgaacagggacatttgcggggt
ttcgcgaagatcgtttcggacatcaccgacagtcgcgctgcggaagacaccatccgtgct
cgtgaagaacatctggcgtcgatcctctcgacggtcccggacgccatggtggtgatcgat
cataaaggcgtcatcctctccttcagttccgccgcacaggcactgttcggctacacggag
gacgagatcgtcggctgcaatgtcagcacgctcatgccgtcaccggatcgtgagcaccat
gacggctacatccggcgatatctcgaaaccggtgagaagcggatcatcgggatcggccgg
atcgtgttcgcccagcgcaaagacggctcgactttccccatggagctttcgatcggcgaa
gcgaagagcaggtcgcaacgcattttcacgggcttcattcgcgatcttacggaccggcgg
cgtactgaagagcgactgcaatccttgcagtccgagcttatccacgtgtcacgggtgagc
gcgatgggtaccatggcctcgaccctcgcccacgaactcaatcagccgattgcagccatt
gccaattacgtggaggcggtccgcgatcagctgctcgatcctcgggacgaggatctgccc
atgatgcgtgaagctcttgacgatgcagccaaggacgccctgcgtgctggccagatcgtt
cgtcgcttgcgcgatttcgtggcgcggggggaagtggaacggtcggtagaagaattgcca
gccctgattaaagatgcttcggttctgggcctgatgggcgcgcgtgagcatggcatcgag
gccaccttcgagctggatccatccgcttcgccagtcctggtcgatagagtgcaaatccag
caggtgcttatcaatctcctacgcaatgccggcgaagcgatgagtgactccccagagcgc
cgggtacacgtaacaagcagtcctgatagaggggggctggtgcgcgtcagcgtggccgac
accggacctggcgttgccaaggagatcgcggagcaactctttagcgctttcaccagcagc
aagccgcagggcatgggcctgggcctttcgatctgccgcacgatcatcgaggcaaatggc
ggacgcatctggatggaacctcggccagaaggcggcacgatcttccatttcaccttgcag
cgcgcgcagacggggaacgagcatgagcagcagtaa
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