Novosphingobium sp. BL-52-GroH: ACFFDA_28275
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Entry
ACFFDA_28275 CDS
T11269
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
novb03000
]
ACFFDA_28275
Transcription factors [BR:
novb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ACFFDA_28275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR
TrmB
MarR_2
GAF
GAF_2
HTH_23
HTH_47
Motif
Other DBs
NCBI-ProteinID:
XKH13339
LinkDB
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Position
1:complement(3247524..3248384)
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AA seq
286 aa
AA seq
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MASRAVIPLDAKGDTIAIFANDVDEESSGGRGIPIRAISRAISVLQAINQTGSLNLMEIA
TASQVPYPTACRIVQTLLHEGLIEREESRKYYRPTALVQTLSQGFQGHGELVQLSRPHIA
ALTREIGWPISLSTHVGSSMVLRDSTHSLTSLCFNEYHPGYAMPILECAAGLVHLAFIPD
DERDTILRNLARLGDDETQRMLEIMRQGALIDGVRSSGYAARSYNRFTLNPGKTSSIAVP
IVDRGVVLGCLTVAFFATALEIREGVRELLPRLKDCARKIALQMGG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacgcgccgtcattccgctcgacgccaagggcgacaccatcgcgatcttcgcc
aacgatgtcgacgaggaaagttcgggaggccgtggcatcccgatccgggcgatcagccgc
gcaatcagtgtcctccaggcgatcaaccagacgggctcgctgaacctgatggaaatcgcg
acggcgtcgcaggtgccttatcccaccgcctgccggatcgtgcagacgctgctccacgaa
ggcctgatcgagcgggaggagagccgcaagtactatcgtccgacggcgctggtgcagacc
ctgtcccaaggtttccagggccacggcgaactcgtgcagttgtcgcgcccgcacatcgcc
gcgctgacccgcgagatcgggtggccgatctcgctgtcgacccacgtcggcagttcgatg
gtcctgcgcgattccacccattcgctgacatcgctgtgcttcaacgaatatcaccccggt
tacgcgatgccgatccttgagtgtgccgccggcctcgtccatctcgccttcatcccggac
gacgagcgcgacaccatcctgcgcaatcttgcgcgcctcggcgacgacgagacccagcgc
atgctcgagatcatgcgccagggcgccctgatcgacggcgtccggagcagcggatatgcg
gcgcgaagctacaaccgcttcacgctcaatcccggaaagacctcgtcgatcgccgtgccg
atcgtcgaccgcggcgtggtgctcggatgcctgaccgtcgcattcttcgcgacggccctg
gaaatccgggaaggcgtgcgcgaactgctcccccgtctcaaggactgcgcgcgcaagatt
gccctccagatgggtggctag
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