Novosphingobium sp. BL-52-GroH: ACFFDA_28660
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Entry
ACFFDA_28660 CDS
T11269
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACFFDA_28660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
novb02044
]
ACFFDA_28660
02035 Bacterial motility proteins [BR:
novb02035
]
ACFFDA_28660
Secretion system [BR:
novb02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
ACFFDA_28660
Bacterial motility proteins [BR:
novb02035
]
Pilus system
Pilus assembly proteins
ACFFDA_28660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
XKH13412
LinkDB
All DBs
Position
1:complement(3331052..3332671)
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AA seq
539 aa
AA seq
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MTSLDTARRAAVRFTAFGGTTMKSSLSRTTRLLTTMLTATCAAAPLAVAVAAPAGAQPGM
SSVVRPAQDIDLSIGNGQLVNVPGNMTDVFVANDSIADVQVKSARQFYVFGKGGGTTTVY
ASNAAGAVVWSGTIRVGSNLDSVDSMLRLAMPEARLAVSTMGTSTFLLTGTVRSPEDAAE
AERLVKAYAGKDANVISRLRTATPLQVNLQVRIAEVSRSLVKSLSVNLTSYDATSGAKFI
IGQGSGKFPQVTANAPIGIGDEATDGLTSIAPNATGTTLGFAKKILGMNLLGALDAGETV
GLVSTLAQPNLTALSGETADFLAGGEYPIPISQGLGTTSVEYRKYGISLSYTPTVLASGR
ISMRVRPEVSELSSEGAVSLNGYSIPALTIRRTETTIELGSGQSFMIAGLLSNNTKNSIQ
KMPGAGDLPILGSLFRSTSYTRGETELVIVVTPYLVNPVDGSQIALPTDGFNSPNELQRL
LGNMASDGVSNTRRPGPTQGSSSSSATPGVSAAEVPATSGKSATRTAAGDAAKPGFSLK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtctcgacaccgcgcggcgcgccgccgtccgtttcaccgcctttgggggcacc
acgatgaagtccagtctttccaggaccacgcgccttctcacgaccatgctgaccgccact
tgcgcggccgcgccgctggccgtcgccgtcgcggctccggccggcgcccagccgggcatg
tcctcggtcgtgcgaccggcgcaggacatcgacctgtcgatcggcaacggccagctcgtc
aacgtgccgggcaacatgaccgacgtcttcgtcgccaacgattcgatcgcggacgtccag
gtcaagtcggcgcgccagttctacgtcttcggcaagggcggcggcaccaccacggtctat
gccagcaacgctgccggcgcagtggtctggtccgggacgatccgggtcggctccaacctc
gacagcgtcgattcgatgctgcgcctggcgatgccggaggcccggctcgcggtatcgacg
atgggcaccagcaccttcctgctgaccggcaccgtccgctcgcccgaagatgccgccgag
gccgagcgcctggtgaaggcctatgccggcaaggacgccaacgtcatcagccgcctgcgc
acggcaacgccgctgcaggtcaacctgcaggtgcgcatcgccgaggttagccgttcgctg
gtcaagtcgctgagcgtcaatctgaccagctacgatgcgacctcgggcgccaagttcatc
atcggccagggctccggcaagtttccgcaggtcactgccaacgcgcccatcggcatcggc
gatgaggccaccgacggattgacgagcatcgcgcccaacgccaccggaacgacgctgggc
ttcgccaagaagatcctgggcatgaacctgctcggcgcgctcgacgcgggcgagacggtc
ggcctcgtcagcacccttgcgcagcccaacctgaccgcgctttcgggcgagaccgccgac
ttcctcgccggtggcgaatacccgatcccgatcagccagggcctgggcacgacctcggtg
gaataccgcaagtacggcatcagcctgagctacaccccgaccgtgctggcaagcggccgc
atctcgatgcgcgtgcgcccggaagtctccgagctgtcgtccgagggcgccgtctcgctg
aacggctactcgatcccggcgctcaccatccgccgcaccgagacgaccatcgaactgggc
tcgggccagagcttcatgatcgccggactgctgagcaacaacaccaagaactcgatccag
aagatgcccggcgccggcgacctgccgatcctgggctcgctgttccgctcgaccagctac
acgcgcggcgagaccgaactggtgatcgtggtgacgccctacctcgtcaacccggtcgac
ggctcgcagatcgccctgcccaccgacggcttcaactcgcccaacgagttgcagcgcctg
ctcggcaacatggccagcgacggcgtcagcaacacccggcgcccgggaccgacgcagggc
tcgtcctcgtcttccgccacccccggcgtgagcgcggccgaagtcccggcgacctcgggc
aaatccgccacccgcaccgcggccggcgacgccgccaagcccggcttcagcctgaagtga
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