Novosphingobium sp. BL-52-GroH: ACFFDA_28880
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Entry
ACFFDA_28880 CDS
T11269
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACFFDA_28880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novb03400
]
ACFFDA_28880
DNA repair and recombination proteins [BR:
novb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACFFDA_28880
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACFFDA_28880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
XKH13451
LinkDB
All DBs
Position
1:3373281..3373886
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AA seq
201 aa
AA seq
DB search
MHFRAPAIVCAAFPHGETAVIARLLTADHGLAAAYVAGGRGRQLRPALIPGNTVDADVRS
KSESQLPFARIELVQSRAPWLAEPLPAAAIGWVTALTATALPDRQPFPVLFGALEGVLEA
ICFAPSARGWALGLVRYEVLLLRELGYGTPVSRPPDDDWAAILDTFDRIGRELARYPLAD
RRRDVMAARTQLRERLIRIDT
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccgcgcgcccgccatcgtctgtgccgcatttccgcatggcgagaccgcggtt
atcgcccgcctgctgacggccgaccacggccttgccgccgcctacgtcgcggggggcagg
gggcggcaactgcggcctgcgctgattccgggcaacacggtggacgccgacgtccggtcg
aaatccgaaagccagcttcccttcgcccgcatcgagctggtgcagagccgcgccccgtgg
ctggccgaacccttgcccgccgccgcgatcggctgggtcacggcgctcaccgccaccgcg
ctgcccgaccggcagccgttcccggtcctgttcggcgcactcgagggggtgctggaggcg
atctgcttcgctccgtccgcgcgggggtgggcgctcgggctggtgcgctacgaggtcctg
ctgcttcgcgaactgggctacggcacgcccgtttcccgccccccggacgacgactgggca
gcaattctcgacacattcgaccgcatcgggcgcgaattggcccgctacccgcttgccgat
cgccgcagagacgttatggcggcgcgcacccagctgcgtgagcggctgatccggatcgat
acctag
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