Novosphingobium sp. BL-52-GroH: ACFFDA_29075
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Entry
ACFFDA_29075 CDS
T11269
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
novb Novosphingobium sp. BL-52-GroH
Pathway
novb00020
Citrate cycle (TCA cycle)
novb00190
Oxidative phosphorylation
novb00650
Butanoate metabolism
novb00720
Other carbon fixation pathways
novb01100
Metabolic pathways
novb01110
Biosynthesis of secondary metabolites
novb01120
Microbial metabolism in diverse environments
novb01200
Carbon metabolism
Module
novb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
novb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
novb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ACFFDA_29075 (sdhA)
00650 Butanoate metabolism
ACFFDA_29075 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
ACFFDA_29075 (sdhA)
00720 Other carbon fixation pathways
ACFFDA_29075 (sdhA)
Enzymes [BR:
novb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
ACFFDA_29075 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
XKH13489
LinkDB
All DBs
Position
1:3418751..3420559
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AA seq
602 aa
AA seq
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MSAPAYKIIDHLYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQGGIAA
SLQNNSPDHWTWHMFDTVKGSDWLGDQDAIEYMVREAPQAVYELEHAGVPFSRNPDGTIY
QRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYQSDFFIEYFAIDLIMENG
VCRGVIALCMDDGTIHRFRSQAVVLATGGYGRSYFTATSAHTCTGDGGGMVLRAGLPLQD
MEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAL
EIREGRGVGPHKDHIYLHLDHIDPKVLGERLPGITESGKIFAGVDLTRQPLPVVPTVHYN
MGGIPTNYHGEVMTIGADGNPETVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRAT
GHRLKEIVKAGAAQAELPKDSADLSLTRLDHFRNAKGGTPTAEIRTEMQRTMSLHAAVFR
TDELMVEGKEKLAATYEKFQDVNVTDRGLIWNSDLVETMELDNLISQATVTLHGAQNRKE
SRGAHAHEDFPNRDDVNWMKHTAAWFNGWGGKGGEVRIDYRPVHEFTLTDDISYIKPKAR
VY
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccctgcctacaagatcatcgaccacctctacgacaccgtcgtcgtcggcgcc
ggcggctcgggcctgcgcgccacgatgggttcggccgaggccggcctcaagaccgcgtgc
atcaccaaggtcttccccacccgttcgcacaccgttgcggcgcagggcggcatcgccgcc
tcgctgcagaacaactcgccggaccactggacctggcacatgttcgacaccgtcaagggg
tcggactggctgggtgaccaggacgccatcgaatacatggtgcgcgaagccccgcaggcg
gtctacgagctggagcacgccggcgtgccgttcagccgcaaccccgatggcacgatctac
cagcgcccgttcggcggccacatgcagaacatgggtgaaggcccgccggtccagcgcacc
tgcgccgcggccgaccgtaccggccacgccatgctgcacgcgctgtaccagcagtcgctg
aagtaccagtcggacttcttcatcgaatacttcgcgatcgatctcatcatggagaacggc
gtctgccgcggcgtcatcgcgctgtgcatggacgacggcacgatccatcgcttccgctcg
caggccgtcgtgctcgcgaccggcggctatggtcgctcgtacttcactgcgacctcggcc
catacctgcaccggcgacggcggcggcatggtgctgcgcgcgggcctgccgctgcaggac
atggaattcgtgcagttccacccgaccggcatctacggcgccggcgtcctcatcaccgag
ggtgcgcgcggcgagggcggctacctcaccaactccgagggcgagcgcttcatggagcgt
tacgcgccttccgcgaaggaccttgccagccgcgacgtcgtctcgcgctcgatggcactg
gaaatccgcgaaggccgcggcgtcggcccgcacaaggaccacatctacctgcacctcgat
cacatcgatcccaaggtgctgggcgagcgtcttccgggcatcaccgaaagcggcaagatc
ttcgccggcgtcgacctgacccgccagccgctgcccgtggttcccaccgtccactacaac
atgggcggcattcccacgaactaccacggcgaggtcatgacgatcggcgccgacggcaac
cccgaaacggtcgtccccggcctgttcgcagtgggtgaggcggcttgcgtctcggtccac
ggcgccaaccgcctcggttcgaactcgctgatcgacctcgtggtcttcggccgcgccacc
ggtcatcgcctcaaggaaatcgtcaaggcgggcgccgcccaggcggaactgcccaaggac
tcggccgacctgtcgctcacgcgcctcgaccatttccgcaacgccaagggcggcacgccc
acggcggagatccgcaccgagatgcagcgcaccatgtcgctgcacgcggcggtgttccgc
accgacgaactgatggtcgagggcaaggaaaagctcgccgcgacttacgagaagttccag
gacgtgaacgtcaccgaccgcgggctgatctggaactccgacctcgtcgagacgatggaa
ctggacaacctgatctcgcaggcgaccgtcacgctgcacggcgcgcagaaccgcaaggaa
agccgcggcgcccacgcgcacgaggacttcccgaaccgcgacgacgtgaactggatgaag
cacaccgcggcctggttcaacggctggggcggcaagggcggcgaagtccgcatcgactat
cgcccggtccacgagttcacgctcaccgacgacatttcgtacatcaagcccaaggcccgc
gtgtactga
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