Novosphingobium sp. BL-52-GroH: ACFFDA_29495
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Entry
ACFFDA_29495 CDS
T11269
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
novb03009
]
ACFFDA_29495
Enzymes [BR:
novb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACFFDA_29495
Ribosome biogenesis [BR:
novb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACFFDA_29495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
XKH13568
LinkDB
All DBs
Position
1:3523778..3525034
Genome browser
AA seq
418 aa
AA seq
DB search
MTESEEILRIASKGDGITASGRFAWGAAPGDRLRIDDTLEWGPHHVEPPCKHFGQCGGCQ
LQQLDEESLAAFVESRVANASASQELGAERLGAPHLSPPSSRRRASLRAESSGGRIVIGY
REAKSHRIVELEECHVIAPEFVALLGPLRKLLITMGKAAPARKGGKPGKSKHATPRMAAD
IEMTLVDQGVDLGVKGLTAEGLAATEAMLAFAQEHKLARLTMDGGYGFETVWEPVPVTVT
LGGVKVPFPPASFLQATKDGEDTLVAATREWLAGAPTVADLFSGLGTFAFALAGPDTKVY
AAEAARDTHLAAKAGADRAQLPIFSAHRDLFRNPLQADELNRFAAVVLDPPRAGAREQVE
CIATSTVNRVVYISCNPSSWSRDAARLVEAGFRLVELRPVGQFRWSTHVELASYFVRG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatccgaggaaatcctgcgcatcgcctcaaagggcgacggcatcacggcgtcc
ggccgcttcgcctggggcgcggcgcccggcgaccgcctgcgcatcgacgacacgctcgag
tgggggccgcaccacgtcgagccgccgtgcaagcacttcggccagtgcggcggctgccag
ctccagcagctcgacgaggagagcctggccgccttcgtcgagagccgcgtggccaatgcc
tcggcctcgcaggagcttggcgcggaacggctgggcgcgccgcatctctcgccgccatcc
tcgcgccggcgcgcgtcgttgcgggcggaaagctccggcggacggatcgtcatcggctac
cgcgaggcgaagtcacaccgcatcgtcgagctggaggaatgccacgtcatcgcgcccgaa
ttcgtggcgctgctggggcccttgcgcaagctgctcatcaccatgggcaaggcggcgccg
gccaggaagggcggcaagccgggcaagtccaagcacgcgacgccccgcatggccgccgac
atcgagatgacgctggtggaccagggcgtcgacctcggcgtcaaggggctgaccgccgag
ggtctcgcggccaccgaggcgatgctggccttcgcgcaggagcacaagctggcgcggctg
accatggacggcggctacggcttcgagacggtgtgggagccggtgccggtgacggtgacg
ctgggcggcgtgaaagtgccgttcccgcccgcttcgttcctccaggccaccaaggatggc
gaggacacgctggtcgccgccacgcgcgagtggctggccggggcgccgacggtggcggac
ctgttctcggggctcgggaccttcgccttcgcgctcgccgggccggacacgaaagtctac
gccgccgaggccgcgcgcgacacgcacctggccgccaaggccggcgccgaccgggcacag
ttgccgatcttctcggcgcatcgcgacctgttccgcaacccgctgcaggcagacgagctg
aaccgcttcgccgcggtggtgctcgatcccccgcgggccggcgcgcgcgagcaggtggag
tgcatagccacctcgaccgtaaatcgggtagtctacataagctgcaacccgtcgagctgg
tcgcgcgatgcggcgcggctggtcgaggccgggttccggctggtcgagctgcggccggtg
gggcagttccgctggtcgacgcatgtggagctggcgagctacttcgtgcgggggtga
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