Novosphingobium sp. BL-52-GroH: ACFFDA_29605
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Entry
ACFFDA_29605 CDS
T11269
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
novb Novosphingobium sp. BL-52-GroH
Brite
KEGG Orthology (KO) [BR:
novb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACFFDA_29605 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novb03019
]
ACFFDA_29605 (rnc)
03009 Ribosome biogenesis [BR:
novb03009
]
ACFFDA_29605 (rnc)
03036 Chromosome and associated proteins [BR:
novb03036
]
ACFFDA_29605 (rnc)
Enzymes [BR:
novb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ACFFDA_29605 (rnc)
Messenger RNA biogenesis [BR:
novb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACFFDA_29605 (rnc)
Ribosome biogenesis [BR:
novb03009
]
Eukaryotic type
90S particles
RNase
ACFFDA_29605 (rnc)
Prokaryotic type
rRNA processing factors
ACFFDA_29605 (rnc)
Chromosome and associated proteins [BR:
novb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ACFFDA_29605 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
XKH13590
LinkDB
All DBs
Position
1:complement(3547939..3548607)
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AA seq
222 aa
AA seq
DB search
MLDAQTRAFLTRHAGCEPVDEALWLSALTHGSTGEKRNYERLEFLGDRVLGLSVADWLFS
NSDEAEGRLSQRLNALVSRATCAIIAREIGLGPHMRLGKQARDDGGEDSENILGDVMEAI
IGACFTERGFDTARAMVLGLWNDVLQGKTGKRKHPKSALQEWTAGNRRRMPEYRLVDRSG
PDHAARFTVEVSVHNVGAAQATAHSKQDAETQAAEEFMRKFG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgcacagacccgtgccttcctgacccgacatgccggttgcgagcccgtcgac
gaggctctctggctctccgcgctcacccacggctcgaccggcgagaagcgcaattacgaa
aggctggagttcctcggcgaccgcgtcctcggactgtcggtggccgactggctgttctcc
aacagcgacgaggccgagggccgcctctcgcagcgcctcaacgcgctcgtcagccgtgcg
acctgcgcgatcatcgcgcgcgagatcggcctgggaccgcacatgcgcctcggcaagcag
gcgcgcgacgacggcggcgaggattcggagaacatcctgggcgacgtgatggaggcgatc
atcggcgcctgcttcaccgagcgcggcttcgacacggcgcgcgccatggtcctgggcctg
tggaacgacgtgctccagggcaagaccggcaagcgcaagcaccccaagtcggccttgcag
gaatggaccgccggcaaccgccgccgcatgcccgaatacaggctggtcgaccgctccggc
cccgaccacgccgcgcgcttcacggtcgaagtgtcggtccacaacgtcggcgcggcgcag
gccacagcccactccaagcaggacgccgaaacccaggcggccgaagaattcatgaggaag
ttcggatga
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