Novipirellula methanifontis: SH528x_001506
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Entry
SH528x_001506 CDS
T11743
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
novi Novipirellula methanifontis
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
TP_0454_N
HTH_30
HTH_20
AAA_16
HTH_28
AAA
HTH_23
HTH_1
Mg_chelatase
HTH_29
Torsin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XZE61916
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Position
complement(2131781..2133127)
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AA seq
448 aa
AA seq
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MKILVVDDEPAARYALTKALRSEGRQLLEADNGEAALSIIRTDAPDLVFLDLNMPTHDGM
FVLQSLQQDAATVTPEIIVVTANNEVSLAVQCVHLGATDFVTKPYDVQHVRSMATRSQQR
VVLQQKVQDLENGSESVQFGQLLGTSRPMRTLFSQIDKAAKTSLPVLIRGESGTGKELVA
RELHARSNRASKPFIAVNTAAIAASLAESELFGHVKGAFTGADHNRDGVFRQADGGTLFL
DEIGDMPAAVQTRLLRVLQEGIVQPVGTEQGVKVDVRVISATHQNLEAAIEDKVFRQDLY
FRLKGIELFIPPLRSRHEDILLLANRFLPPDVTISDEAISALLQHVWPGNVRELQQLVHA
SAALCEEHRVTRCDLGLSLDRNASDEVPFERYLDLPLTEARTQLVEDFERLAIVRALETE
SHNVSAAARRLGIHRQSLQQKMKALEIQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttggtcgtggatgacgaaccggcggctcgctatgcgctgaccaaggcgctc
agatccgaagggcgacagttgctcgaggccgataacggcgaagcagcactgtcgatcatt
cgcacggatgcacccgacctggttttcttggacttgaatatgccaacgcatgacggcatg
ttcgttttacagtcgctgcagcaagatgccgccacggtgacgcccgagatcattgtcgta
acggcaaacaacgaagtcagtttggcggtacagtgtgttcacctcggcgcgaccgacttt
gtcaccaaaccatacgatgttcagcatgttcgctcgatggccacacgttcgcagcaacgg
gttgtattgcagcagaaagtacaggatcttgaaaacggcagtgaatcggttcagttcggt
caattgctaggtacgagccgaccgatgcgaaccctgttttcgcaaatcgacaaggcggcg
aagacctcgctgcctgttttgattcgaggcgaaagtggtacgggaaaagagctggtcgcc
cgcgagttgcatgcacgaagtaatcgagcgagcaagccattcattgccgtgaacaccgcc
gcgattgcggcatcgctggccgagagcgaactatttggacacgtcaaaggggcgttcact
ggcgccgatcacaatcgcgatggcgtgttccggcaagcggacggaggcacattgtttttg
gacgaaattggcgatatgcctgccgcagtgcaaacgcgtctgttgcgagtattgcaggaa
gggatcgtacaaccggtcggcaccgagcaaggggtcaaggtcgatgttcgtgtgatcagt
gcgactcatcaaaatctcgaagcggcgatcgaagacaaagtgtttcgccaggatttgtat
tttcggctgaagggaatcgaactatttatccccccgcttcgttcacgccatgaagacata
ctgctattagcgaaccggtttctgccgcccgacgtgacaatatctgacgaagcgatctcg
gcattgctgcaacatgtgtggcccgggaatgtacgtgagctgcagcaattggtgcatgcg
tcggcggcgttgtgcgaagagcatcgggtgacgcgatgcgacctcggtttgagcctcgat
cgcaacgcgagtgacgaggttccgtttgagcggtacctcgatctaccgctgactgaagcg
aggacgcagttggtcgaagattttgagcgactggcgattgtgcgtgcgctggaaaccgag
tcgcataacgttagtgcggcagcgcggcggcttggcattcaccgccaaagcctgcagcaa
aaaatgaaagcgttagagatccaatag
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