Novipirellula methanifontis: SH528x_002410
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Entry
SH528x_002410 CDS
T11743
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
novi Novipirellula methanifontis
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
DUF7939
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
XZE62779
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Position
3381408..3383450
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AA seq
680 aa
AA seq
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MNESIAKRVAELRTEIRRLDHLYYVEAKPAVTDLQYDRLLEELRQLETDHPEFASADSPT
QRVGDAPVPHLVQVAHSAPMLSIDNTYSREELKAYFDRTEKTLGEPIQWVMEFKIDGVAA
SIRYEQGNMAVALTRGNGQVGDDITHNVRTIRDVPLRLVGDTPPEVLEVRGEVYMTNADL
ADLNLRQTEAGSEPYKNTRNVTAGTIRLLDPAIAAERKLRFFCHGIGETTGLKAKNHIEF
LDEVGKLGIPPTPEVQVFKSSADALKAVAVFEEEMPDLPFEVDGIVFKVNRFDQRERLGI
RSKSPRWVIAYKFERYEAVTVLESISVQVGKTGAITPVAHLKPVDIADTTVSRASLHNAD
EIERLDVREGDVVVVEKAGKIIPKVVRVEKHERKTERPPFQFPTHCPVCSTELVRDDGGV
YIRCPSPECPAQLRQRLIYFGSRPGMDIDGLGDELVDLLVQRGIVSSYADLYRLTVAELA
DVNWLKQRKGKDGKMIDVQVGKKNAENLVVGVEASRTRGLARVLASISIRHVGPRVAQLI
TRHYPTIDLLQSASIEDLASIHEIGDAIAKSMHEFLHSDYGKKVFAEFSEVGVKLSEDVS
AQSGGPLEGKTLVVTGTLQQFNRDEIKGLIEKLGGRASSSISKKTDYLVAGEKAGSKLAK
AESLGVKVLTEDDFKALIEE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaatctatcgcgaaacgtgtggcagagttacgaaccgagatccgccgcctggat
cacctgtattatgtcgaggcaaaacctgcggtcacggatctgcagtacgaccgattgctc
gaagaacttaggcaactcgagaccgatcatcccgaattcgcctccgccgactcgccgacc
cagcgagtcggtgacgcaccggttccgcacttggttcaagtcgctcattcggcgccgatg
ttgtcgatcgacaacacctacagccgcgaggaactgaaggcgtattttgatcgcaccgaa
aaaacgctcggcgaaccgatccaatgggtgatggaattcaaaatcgacggtgttgcggcc
tcgatccggtacgagcaaggcaacatggcagtcgcactgacgcggggcaacggacaagtc
ggtgacgacatcactcacaacgtacgcaccatccgcgatgtgccattgcgtctggtcggt
gatacgccgccggaggtgctcgaggttcgcggcgaagtttacatgacgaacgcggatttg
gcggatctaaatctgcgacaaaccgaggcaggttccgagccttacaaaaacacacgcaac
gtcaccgccgggacgattcggttgctcgatccggcaatcgcggccgaacgcaaactccgt
tttttctgtcacggcatcggcgaaacgaccggattgaaagctaaaaaccatatcgagttt
ttggacgaagtcggcaagcttggcatccccccgacccctgaagtccaggtgttcaaaagc
tcggccgacgcgctcaaggccgttgcggtgtttgaagaggagatgcccgatttgcccttc
gaggtggacgggattgttttcaaagtcaatcgctttgaccaacgcgaacgactggggatt
cgcagcaaaagtccgcgttgggtgatcgcgtataaattcgagcgttacgaagcggtcacg
gtgctcgaatcgatcagtgtccaagtcggcaagaccggagcgatcactccagtggctcat
ctgaaaccggtcgacatcgcggacaccacggtgtcacgagcttcgcttcacaatgctgac
gaaatcgagcggcttgacgtccgcgaaggtgacgtcgtcgtggtagaaaaggctggcaag
atcattcccaaagtcgtgcgtgtcgaaaagcacgaacgcaaaaccgagcgacctccattt
caattcccgacgcattgtcctgtttgtagtaccgaattggtgcgtgacgacggcggcgtt
tacattcgttgccccagtccggaatgtcccgcgcaattgcgacaacgtttgatctatttc
ggcagccggccggggatggacatcgatggactcggtgacgagttggttgatctgctagtt
caacgcggcatcgtttccagttatgccgatctgtatcgattgaccgttgcagagcttgcc
gatgtcaattggctgaaacaacgcaaaggcaaagacggcaaaatgattgacgtccaagtc
ggcaaaaagaacgcggaaaacttggtcgtgggtgtggaggcaagtcggactcgggggcta
gcacgtgtactcgcgtcgatatcaatccgccacgtcggacctcgcgtcgctcagctgatc
acgcggcactacccgacgattgatctattgcaatccgcatccatcgaagacttggcatcg
attcatgaaatcggcgacgcgattgccaaaagcatgcacgagtttctacacagcgactac
ggcaaaaaagtcttcgccgagttttccgaagtgggtgtcaagcttagtgaagatgtcagt
gcacaaagtggcggtccgctcgaaggcaaaacactggtggtcaccggaacgcttcagcaa
ttcaatcgcgatgaaatcaaaggcttgatcgaaaaactcggtggacgtgcatcgagtagc
attagcaaaaagaccgactacttggtcgccggcgaaaaggcaggcagcaagttggcaaag
gccgagtcactgggcgtaaaggtgctgaccgaagacgatttcaaagcattgatcgaagaa
taa
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