Novipirellula methanifontis: SH528x_004541
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Entry
SH528x_004541 CDS
T11743
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
novi Novipirellula methanifontis
SSDB
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
AAA
Mg_chelatase
Phage_CP76
HTH_30
DUF3263
AAA_16
HTH_10
Motif
Other DBs
NCBI-ProteinID:
XZE64200
LinkDB
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Position
6304642..6305991
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AA seq
449 aa
AA seq
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MHILFADDEKNLQELMRSELPRMGYTVTVCPDGLTAVAALEKEPFDCLLVDLDMPGMNGI
DVIGKARELRPEIEAVVMTGKPSQETAIAALRHQAFDYLTKPCRLADIAGLLGRVAERRH
TKRQLAALQHRLKRAEGDSKMVGEGSAMDSVRNLIAKVAPTESSVLIRGETGCGKELVAR
AIHESSLRAEQPMVAINCGALPENLIESELFGHCKGAFTGADAARTGLFEVADGGTIFLD
EVGELPLAMQAKLLRVLETGDIRRLGDNQTVNVNVRVVCATHRDLEQMVEEGTFREDLMF
RINTFEIQVPSLRERTEDIIPLATHLLRRHRTDGGNEQLFTPEAVLELKSHQWPGNVREL
ANVVEHAAILCDSLPIGTDHLPRHFGRRQLRKELRDSEPMTLRDMEMLAIERSLARHDGN
KPAVAEELGVSLKTLYNKINSAEEKKMVG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcctgtttgcagacgatgaaaagaatctgcaagaattgatgcgtagcgagttg
cctcgcatgggatataccgtgacggtttgtcccgatggcttgaccgccgtagcggcactc
gaaaaagaaccgttcgattgcctgctcgtcgacctggatatgccaggaatgaacgggatc
gacgtgatcggcaaagcgcgtgaattgcgacctgaaatcgaagcggttgtgatgaccggt
aagccaagccaagaaacggcgatcgcagcgctgcgccatcaagcattcgattatctgacc
aaaccttgccgtttagccgatattgcgggactgcttggtcgagttgccgagcggcgacat
accaagcgccaactcgccgcgcttcagcatcggctcaaacgagccgaaggcgacagcaag
atggtaggcgagggatctgcaatggactccgtccgaaacctaattgcaaaagttgccccc
accgaaagcagcgtcctgatccgaggcgaaactggatgcggaaaagaattggtggctcgt
gcgattcatgaatcaagcttgcgtgccgagcaacctatggtcgcgatcaactgtggcgcg
cttcctgaaaatttgatcgaaagtgaactgttcggtcattgcaaaggtgcgttcacaggc
gctgatgcggcccgcacaggacttttcgaggtcgccgacggaggcacgatcttcttagac
gaagttggcgaattgccactggcgatgcaagccaagttgttgcgagtccttgaaaccgga
gacattcgtcggctcggagacaatcaaacggtaaacgtgaacgtccgcgtcgtctgtgca
acgcaccgtgaccttgaacaaatggtcgaggaagggacgttccgcgaggatttgatgttc
cgcatcaatacctttgaaatccaggttccatcgctacgtgagcgaaccgaagacatcatc
cccttggcgactcatctacttcgccgacatcgcaccgatggcggtaacgaacagctgttt
acgcctgaggctgtcctggagctgaaatcgcatcaatggcccggcaacgtgcgtgagctt
gcaaatgtggtcgagcatgccgcaatcctgtgcgattcgttgccgatcgggaccgatcat
ctgccgcgtcactttggtcgtcgacaattaagaaaggaattgcgagattccgaaccgatg
acgttgcgagatatggaaatgctcgcgatcgaacgctcgctggccaggcacgatggcaat
aagcccgcggtggccgaagagctcggtgtcagtctgaagacgctgtacaacaagatcaat
tcagccgaagagaaaaagatggtcggctaa
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