Novosphingobium sp. ES2-1: IM701_00045
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Entry
IM701_00045 CDS
T10689
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IM701_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_00045
Enzymes [BR:
novo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
IM701_00045
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IM701_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QOV93945
LinkDB
All DBs
Position
complement(10327..11802)
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AA seq
491 aa
AA seq
DB search
MAFPSAPYDDDNNGSGGLLARESAGDNAPALSISEISALLKRTVEDRFGFVRVRGELSGV
KRAASGHLYLCLKDENARLDGVMWRGGVQRLNFRPEDGVEVIATGKLTTYPGRSNYQIVI
ERMETAGEGALLALLAKLKARLEGEGLFDPARKKPLPFLPRTIGVVTSPTGAVIRDILHR
LSDRFPSRVIVWPVLVQGQGAATQVANAVRGFSDMMPDGPIPRPDLVIVARGGGSIEDLW
SFNEEEVVRAVADCTIPIISAVGHETDTTLCDFAADLRAPTPTAAAELAVPVQAELAAFV
ADLNARQRRALARQLAQAKERLEARSQRLPQPQALLQGQAQRVDDLGERLRRALVHRTEI
AGSVLARHAGALRPALLMARVEREAERLAARRLRPEMLLQRIDHARGKIEALDRLRRSLD
PKAPLQRGYVLVTAPDGHVVRTREDAQARPALRLEFADGTLDVSTGTTVPQTRPASKPRP
AARPEGQQELF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggctttcccttccgcgccttatgacgacgataacaacggctcgggcgggctcctagcg
agggaatcggcaggcgacaacgccccggccctctcgatctccgagatttccgccctgctc
aagcgcaccgtcgaggatcgcttcggctttgtccgagtgcgtggcgagctttcaggcgtg
aagcgcgcggcctcgggccacctctacctctgcctcaaggacgagaacgcgcggctggat
ggcgtgatgtggcgcggcggcgtgcagcgcctgaacttccggcccgaggacggcgtcgag
gtcatcgccaccggcaagctgacgacttacccgggccgctcgaactaccagatcgtgatc
gagcggatggagaccgccggcgaaggcgcgctgctcgcgctcctcgccaagctgaaagcc
cggctggaaggcgaaggattgttcgatcccgcccgcaagaagcccttgccgttcttgccg
cgcaccattggcgtcgtcacctcgcccactggcgccgtgatccgcgacatcctccaccgc
ctgtcagatcgctttcccagccgcgtcatcgtgtggccggtgctggtccagggtcagggt
gcggcaacgcaggtcgccaacgccgtgcgcgggttcagcgatatgatgcccgacggaccg
atcccgcgcccggacctcgtcatcgtggcgcgcggtggcggatcgatcgaagacctgtgg
tcgttcaacgaggaagaggtcgtccgcgccgtggcggattgcaccatcccgatcatcagc
gcagttggtcacgagaccgacaccaccctgtgtgacttcgccgccgacctgcgcgctccg
acgcccactgccgccgctgaacttgcggtgccggtgcaggcggaacttgccgcctttgta
gccgatctcaacgcccgccagcgacgcgccctcgcccgccagctcgcccaggccaaggaa
cgcctcgaagcccgcagccagcgcctgccccaaccgcaggcgctcctgcagggccaggcc
cagcgcgtcgatgatcttggggagcgcttgcgccgcgccctcgtccaccgcaccgagatc
gccggatcggtcctcgcccgccatgcaggagccttgcgccctgccttgttgatggcgcgg
gtcgaacgcgaagcggagcgccttgccgcccggcggctgcgccccgaaatgctgctgcag
cgcatcgaccacgcgcgcggcaagatcgaagcgcttgatcgcctgcgccgctcgcttgat
ccgaaagctcctctccaacgcggctacgtgctggttactgcgccagacggccatgtcgtg
cggacgcgcgaggatgcacaggcgcgtccggcgttgcggctcgaattcgccgacggcacg
ctggacgttagcaccggcaccactgtgccccaaacccgccccgcctccaaaccgcgcccg
gccgcgcggcccgagggacagcaggaattgttctga
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