Novosphingobium sp. ES2-1: IM701_01300
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Entry
IM701_01300 CDS
T10689
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
novo Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_01300
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IM701_01300
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_10
DUF87
ResIII
SLFN-g3_helicase
TrwB_AAD_bind
AAA_22
AAA_16
FtsK_SpoIIIE
AAA
AAA_30
Hydrolase
T2SSE
AAA_7
CbiA
AAA_19
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QOV94161
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Position
268245..269819
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AA seq
524 aa
AA seq
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MDDIYLGLGSNGERQVLRLGRANRHGLIAGATGTGKTVTLQGIAEQFSARGVPVFMADVK
GDLAGIAMPGSPTFKHAASLESRAKELGIEDYAYSDNPAVFWDLYGESGHPIRTTISEMG
PLLLARLMGLNETQEGVLNIAFRYADDNGLLLIDLPDLQSVLVACAENASALATRYGNVS
KASVGTIQRQLLAFESQGADRFFGEPAFEVNDFLKVDDQGRGMVNVLAADKLMQSPKLYA
TFLLWLLSELFEALPEVGDPEKPCLVFFFDEAHLLFDDAPQALMEKVEQVVRLIRSKGVG
VYFVTQNPIDIPEKIAGQLGNRVQHALRAFTPRDQKAIRAAAETFRINKDLDVETVITEL
KVGEALVSTLNEDGSPSVVQRTLIAPPRSRLGPLTPKERAVIQSVSPFDGKYDKAVNRES
AAEVLAQKAADAAAAAQQVEEQGEEAQRASPRRTTTMWERAGKAAAGAVASSAGAVIAAS
ITGKKSRAAPVASGVTAMVGSIATSIGGEALGRFARGILGGLLR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatctaccttggcctcggttccaacggcgaacggcaggtgctgcgccttggc
cgcgccaaccgccacgggctgatcgcgggggcgaccggcaccggcaagacggtgacgctg
cagggcattgccgaacagttctcggcgcgcggcgtacccgtgttcatggccgacgtgaaa
ggcgaccttgcgggcatcgccatgcccggaagcccgaccttcaagcacgccgcttccctc
gaatcgcgggccaaggaactgggcatcgaggactatgcctattccgacaatccggcagtg
ttctgggacctctatggcgaatctggccatcccatccgcacgaccatctccgaaatgggc
ccgctgctgctggcgcggctgatgggcctcaacgagacgcaggaaggcgtgctcaacatc
gccttccgctatgccgacgacaatggcctgctgctgatcgacctgcccgatctgcaatcc
gttctcgtcgcctgtgccgagaacgccagtgcgcttgccacgcgttacggcaatgtctcc
aaggccagcgtcggcacgatccagcgccagttgctcgcgttcgaaagccagggcgcggac
cgcttcttcggcgagccggcgttcgaggtgaacgatttcctcaaggtcgacgatcagggc
cgcggcatggtcaacgtgctcgccgccgacaagctgatgcagagccccaagctttacgcc
acgttcctgctgtggctgctgtccgaactgttcgaggcgctgcccgaagtgggcgatccg
gaaaagccctgcctggtgttcttctttgacgaggcgcacctgctgttcgacgatgccccg
caggcgctgatggagaaggtcgagcaggtggtgcgcctgatccgctcgaagggcgtgggc
gtctatttcgtcacgcagaacccgatcgacattccggagaagatcgcaggccagctcggc
aaccgcgtgcagcacgcgctgcgggcgttcaccccgcgtgaccagaaggcgatccgcgcg
gcggccgagaccttccgcatcaacaaggatctcgatgtcgagacggtcatcaccgaactg
aaagtcggcgaggcgctggtctcgacgctgaacgaggacggctcgccctcggtcgtccag
cgcaccctgatcgccccgccgcgctcgcggcttggaccactgacgccgaaggagcgcgcg
gtgatccagtcggtcagcccgttcgatggcaagtacgataaggcagtgaaccgcgaatcc
gccgccgaagtgctggcgcagaaagcggctgacgcggcagcggcggcacagcaggtggag
gagcagggcgaagaggcccaacgcgcctcgccgcgccggacgacgacgatgtgggagcgc
gcagggaaagctgcggcgggcgcggtggcctcatccgcaggcgccgtgatcgccgccagc
atcaccggcaagaaatcccgcgcggcaccggtggcatcgggcgtgaccgcaatggtcggc
tcgatcgctacctcgatcggcggcgaggcgcttggtcgctttgcgcgggggattttgggt
gggttgttgcggtag
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