Novosphingobium sp. ES2-1: IM701_01590
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Entry
IM701_01590 CDS
T10689
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
novo
Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
IM701_01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
novo03019
]
IM701_01590
03009 Ribosome biogenesis [BR:
novo03009
]
IM701_01590
04131 Membrane trafficking [BR:
novo04131
]
IM701_01590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
novo04147
]
IM701_01590
Messenger RNA biogenesis [BR:
novo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
IM701_01590
Ribosome biogenesis [BR:
novo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
IM701_01590
Membrane trafficking [BR:
novo04131
]
SNARE
SNARE associated proteins
Others
IM701_01590
Autophagy
Aggrephagy
Other aggrephagy associated proteins
IM701_01590
Exosome [BR:
novo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IM701_01590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_2
AAA_33
AAA_14
TIP49
nSTAND3
AAA_28
IstB_IS21
RNA_helicase
AAA_7
NPHP3_N
AAA_18
Mg_chelatase
Zeta_toxin
AAA_3
ABC_tran
DUF815
AAA_17
TsaE
AAA_30
AAA_19
Sigma54_activat
AAA_11
AAA_24
Parvo_NS1
NB-ARC
ATPase
Motif
Other DBs
NCBI-ProteinID:
QOV94215
LinkDB
All DBs
Position
334012..336330
Genome browser
AA seq
772 aa
AA seq
DB search
MADAATEARTDARTVRLQVAGARQEESGHGIARISRHVMSQLGVTEGDVIEIVGKRATAA
RVIQPYPEDEGLELIRLDGLQRANADVGSGEHVEVRKIDSRPAQRVVFAPAQKELRLQGP
AVALKRNFAGRPLVTGDLVATAGQQQVNRTDMPPQLRQMLNAPAFALTQIRLTVVSTSPK
GVVHIDENTEVELRPEYEEPRSSRADVNYDDVGGMGDTIRQLREMVELPLRYPELFTRLG
VDPPKGVLLHGPPGTGKTRLARAVANESDASFFTINGPEIMGSAYGESEKRLREVFEEAT
RNAPSIVFIDEIDSIAPKRSEVHGEAEKRLVAQLLTLMDGLHSRSNLVVIAATNRPDAID
EALRRPGRFDREIVVGVPDESGRREIIGIHTRGMPLAEDVDLQELARTTHGFVGADLAAL
AREAAIEAVRRIMPQLDFEQQTIPQDVLDNLRVERDDFLQALKRVQPSAMREVMVQAPTI
GWADIGGLDDAQDKLREGVELPLKNPEAFHRLGIHPAKGFLLYGPPGTGKTLLAKAVAKE
AEANFIAIKSSDLLSKWYGESEQQIARLFARARQVAPCVVFIDEIDSLVPARGSGQGEPN
VTARVVNTILAEMDGLEELQSVVLIGATNRPNLVDPALLRPGRFDELIYVGTPSVEGREH
ILGIHTRNMPLAGDVDLGRIARETERFTGADLEDVVRRAGLNAIRRAGGNVDQVTAEDFA
GALEASRATVTEQMEEEYGRMKGELKKRAMNPGPLGFITPGMVTPLRESKHG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcggcaaccgaagcccggaccgatgcgcgcaccgtgcgccttcaggttgcg
ggtgctcgtcaggaagaaagcggccacggcattgcccgcatcagtcggcacgtgatgtcg
cagctgggcgtgaccgaaggcgacgtcatcgagatcgtcggcaagcgcgccacggcggcg
cgggtgatccagccctatcccgaggacgaggggctggaactgatccgcctcgatggcctc
cagcgcgccaacgccgatgtcggttcgggtgagcacgtggaagtgcgcaagatcgattcg
cggcctgcgcagcgcgtcgtcttcgcgcccgcgcaaaaggaactgcgcctgcaaggaccg
gccgtggcgctgaagcgcaactttgccgggcgtccgctggtgacgggcgatctcgtggcg
accgccgggcagcagcaggtcaaccgcaccgacatgccgccacagctgcgccagatgctc
aatgcgcctgccttcgcgctgacccagatccgcctgaccgtggtctcgaccagcccgaag
ggcgtggtccacatcgacgagaacaccgaggtggaactgcggcccgaatacgaggagcca
cgctcgagccgtgccgacgtcaattatgacgacgtcggcggcatgggcgataccatccgg
caactgcgcgagatggtcgaactgccgctgcgctatcccgaactgttcacgcgcctgggc
gtcgatccgcccaagggcgtgttgctgcacggcccgccggggaccggcaagacgcgtctg
gcgcgtgccgtggccaatgaaagcgatgcctcgttcttcaccatcaacggccccgaaatc
atgggatcggcctatggcgagagcgagaaacgtctgcgcgaggtgttcgaggaagcgacc
cgcaacgcgccctcgatcgtgttcatcgacgaaatcgattcgatcgcgcccaagcgcagc
gaggttcacggcgaggcggagaagcggctggttgcgcagttgctgacgctgatggacgga
ctgcacagccggtccaaccttgtcgtgatcgcggcgaccaatcgccccgatgcgatcgac
gaagcgctgcgccggcccggccggttcgaccgcgagatcgtcgtcggcgtgccggacgaa
tccggtcgccgcgagatcatcggcattcacacccgcggcatgccgctggccgaggacgtc
gatctgcaggaactggcccgcaccacgcatggcttcgtcggtgccgaccttgcggcgctg
gcccgcgaagcggcgatcgaggcagtgcgccggatcatgccgcagctcgatttcgagcag
cagacgatcccgcaggacgtgctcgacaacctgcgcgtggagcgcgacgacttcctgcag
gcattgaagcgcgtgcagccatcggcgatgcgcgaagtcatggtgcaggcgccaaccatc
ggttgggccgacatcggcggcctcgacgatgcgcaggacaagctgcgcgagggcgtcgaa
ctgccgctcaagaatcccgaggccttccaccgcctcggcattcatccggccaagggcttc
ctgctctatggtccgcccggcaccggcaagacgctgctggccaaggccgtggccaaggaa
gcagaggccaacttcatcgcgatcaagtcgtccgacctgctgtccaagtggtacggcgag
agcgagcagcagattgcccggctctttgcgcgcgcgcgccaggtcgcaccttgcgtggtg
ttcatcgacgagatcgacagcctcgttcccgcgcgcggcagcgggcagggcgagccgaat
gtcacggcgcgggtggtcaacaccatccttgccgagatggacgggctggaggaactgcag
tcggtggtgctgatcggcgcgaccaaccgcccgaatctggtcgatccggcgctcctgcgt
ccgggccgcttcgacgagctgatctatgtcggcacgccgagcgtcgagggccgcgagcac
atccttggcatccacacccgcaacatgccgctggctggcgatgtggaccttggtcgtatc
gcgcgcgagaccgagcgcttcaccggtgccgatctcgaagacgtggtgcgtcgcgctggc
cttaacgccattcgccgtgcgggcggcaatgtcgatcaggtcaccgcggaggacttcgcc
ggtgcactggaggcgtcacgcgcgacggtgaccgaacagatggaggaagagtacggccgg
atgaagggcgagctgaagaagcgcgccatgaatccgggaccgcttggcttcatcacgccg
ggaatggtcacgcccttgcgcgaatccaagcacggctga
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