Novosphingobium sp. ES2-1: IM701_01910
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Entry
IM701_01910 CDS
T10689
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM701_01910 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
novo03400
]
IM701_01910 (uvrB)
DNA repair and recombination proteins [BR:
novo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM701_01910 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IM701_01910 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
DUF87
Kinesin
AAA_22
HAMP
Microtub_bd
AAA_33
SRP54
Motif
Other DBs
NCBI-ProteinID:
QOV94271
LinkDB
All DBs
Position
complement(409651..411840)
Genome browser
AA seq
729 aa
AA seq
DB search
MAELVIRRGLEEPDTSGTFVPHKPQRPDKVEGGKRFKVVSDYQPAGDQPTAIADLVAAAR
DGDQTQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEMKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSTNEAIDRMRHSATRSLLERDDVIIVASVSCIYGIG
SVETYSAMIFDLKVGQTVDSGEIIRKLVALQYKRNDAGFARGNFRVRGDNLEIFPSHYDD
TAWRISFFGDEVEEIVEFDPLTGKSGAKLNNVRVYANSHYVTPGPTMQQAAQAIRFELTE
RLKELVEEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNCLLFLDESHQTVPQIGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
IAVSATPAQWEMEQAGGVFAEQVIRPTGLIDPPVLIRPVEDQVQDCINECKLTAQQGYRT
LVTTLTKRMAEDLTEFMHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRAKQQAYNEEHGITPQTIKRNIHDIVADTASRDGVLVDIDADGANNLVGHNLRGYIEE
LEKRMRAAAADLEFELAGRLRDEIRQLEASELGLPEGERKAPIVGRSNEGKPGTRKTRYG
KSQKTKWGK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcgttattcgcaggggactcgaagagcccgacacctcgggcacttttgtg
ccgcacaagccgcagcgccccgacaaggtggaaggcggcaagcgattcaaggtagtgtcc
gactaccagcctgccggcgaccagcccaccgcgattgcagaccttgtcgctgccgcgcgc
gatggcgaccagacgcaggtgctgcttggcgtcaccggttcgggcaagaccttcaccatg
gccaaggtcatcgaggaactgcagcgccccgccctgatcctggcgcccaacaagatcctc
gccgcgcagctctatggcgagatgaagagcttcttcccggaaaacgcggtcgagtacttc
gtctcgtactacgactattaccagcccgaggcctacgtgccccggtcggacacctatatc
gagaaggaaagctcgaccaacgaggcgattgaccggatgcgccattcggccacgcggtcc
ttgcttgaacgcgatgacgtgatcatcgtggcttcggtttcgtgcatctacggcatcggc
tcggtcgagacatactcggcgatgatcttcgacctgaaggtcgggcagacggtcgacagc
ggcgagatcatccgcaagctggtggcactgcagtacaagcgcaacgatgccggctttgcg
cgcggcaacttccgtgtgcgcggcgacaatctcgagatctttccctcgcactatgacgat
accgcgtggcggatcagcttcttcggcgacgaggtggaggagatcgtcgagtttgatccg
ctgaccgggaagagcggcgcgaagctgaacaacgtgcgcgtctatgcgaactcgcattac
gtgacgccggggccgacgatgcagcaggcggcgcaggctatccgcttcgaactgaccgag
cgactcaaggagctggtcgaggaagggaagctgctcgaagcgcagcggctggaacagcgg
accaacttcgatctggaaatgatcgctgccaccggttcgtgtgcagggatcgagaactac
agccgctttctgacaggccgcctgccaggcgagccgccgccgacgctgttcgaatacttg
ccagacaactgcctgctgttcctcgatgaaagccaccagaccgtgccgcagatcggcgcg
atggcgcggggcgaccaccgccgaaagcttacgctggctgagtatggtttccgcctgcca
agctgcatcgacaaccgtccgttgcgcttcaacgaatgggacgcgatgcgcccgcagacg
atcgcggtttcggcaacgcctgcgcagtgggagatggagcaggcgggcggcgtgtttgcc
gagcaggtcatccggccgactggcctgatcgacccgccggtgctgatccgcccggtcgag
gaccaggtgcaggactgcatcaacgagtgcaagctgaccgcccagcaaggctatcgcacg
ctcgtcaccaccctgaccaagcgcatggccgaggacctgaccgagttcatgcacgaggca
gggctgaaagtccgctacatgcactccgacgtggagacgctggagcgcatcgagctgatc
cgcgacttgcggctgggcgtctatgacgtgctcgtgggcatcaacctgctgcgcgagggc
ctggatattcccgaatgcggcctcgtctgcattctcgatgccgacaaggaaggcttcctg
cgcagcgaaacctctctgatccagaccatcggccgcgccgcgcgcaacgtggatggccgg
gtgatcctgtatgccgaccgcatgaccggcagcatggagcgcgcgatcgccgaaaccgac
cgccgccgcgccaagcagcaggcctataacgaagaacacggcatcaccccgcagacgatc
aagcgcaatatccacgatatcgttgccgacacggcaagccgcgatggcgtgctggtcgac
attgacgccgacggcgccaacaacctcgtcggccacaacctgcgtggctacatcgaggaa
ctggagaagaggatgcgagccgcggcggcggatctggagttcgaactggccggacgcctg
cgcgacgagatcaggcagttggaggcgtcagagcttgggttgccggagggtgagcggaaa
gcgccgattgtcgggcgaagcaatgagggcaagccggggacaaggaaaacgcggtacggg
aagagccagaagacgaagtgggggaagtga
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integrated database retrieval system
