Novosphingobium sp. ES2-1: IM701_02150
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Entry
IM701_02150 CDS
T10689
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo02020
Two-component system
novo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM701_02150
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IM701_02150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
novo02022
]
IM701_02150
02035 Bacterial motility proteins [BR:
novo02035
]
IM701_02150
Two-component system [BR:
novo02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
IM701_02150
Bacterial motility proteins [BR:
novo02035
]
Flagellar system
Flagellar assembly proteins
Others
IM701_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_28
AAA_3
AAA
HTH_20
AAA_2
HTH_23
AAA_19
AAA_7
HTH_29
HTH_24
MerR
MCM
Motif
Other DBs
NCBI-ProteinID:
QOV94312
LinkDB
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Position
complement(457886..459169)
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AA seq
427 aa
AA seq
DB search
MIRDCGALQFTEAAAKAHAALVQRAASVLSSYGAEGQSMLADAFEDAKLPPRKQVVLLER
SAMPAIERQPGSRTATLRYTDGAGEAALSALLACAAKPGAPIAADPESLSVLALAERIAA
TDIPVLINGPTGTGKEVLSRFIHEHSARADKPFIAINCAAMPEAMLEALLFGHQRGAFTG
ANAASEGFFRAADGGTLLLDEIAEMPLTLQAKLLRALQEGEVVPLGATQPVKVDVRVIAC
ANRDLPLEVEEGRFRADLYYRLNVFPLALRALCERPDDIAPLAFAMAMRHSQVAPWISDE
ALAMLAAHSWPGNVRELENVMRRALVLAGNASVIKASHIVFDRPARLINEPVAVPAAADA
KLSNIVQMSEARAILSTLEACNGSRVAAARQLGISERTLRYRLASFREAGIEVNGRSVDG
RAVGGRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgattgcggggcactgcagttcaccgaagcggcggcgaaagcccacgcagcg
cttgtccagcgcgcagcttcggtgctttcgagctacggtgcggaaggacagtcgatgctg
gctgatgccttcgaggacgcgaagctcccgccgcgcaagcaggtggtgctgctggagcgt
tcggctatgccagcgatcgagcgccagcccggcagccggacggcgaccctgcgatacacc
gatggggcgggcgaggctgcgctgtcggcactgctggcctgcgccgcgaagccaggcgcg
cccattgccgccgatcctgaaagcctgtctgtccttgccttggccgaacgcatcgccgcc
accgacatccccgtcctgatcaacggcccgaccggcactggcaaggaagtgctgagccgc
ttcattcacgaacactcggcccgcgccgacaagccgttcatcgccatcaattgcgccgcc
atgcccgaagccatgctcgaggcgctgctgttcggccaccagaggggcgcgttcaccggc
gcgaatgcagccagcgaaggcttcttccgcgcggctgacggtggcacgctgctcctcgac
gagatcgccgagatgccgctgacgctgcaggccaagctgctgcgcgcgctgcaggaaggc
gaagtggtgccgctgggggcaacgcagccggtaaaggtggacgtgcgggtaatcgcctgc
gccaaccgcgatctgccgctggaagtcgaggaaggccgcttccgcgccgatctctattac
cgcctaaacgtcttcccgctggccctgcgcgctctgtgtgagcggcccgacgatatcgcg
ccgctcgccttcgcgatggcgatgcgccattcgcaggtcgctccctggatttccgacgaa
gcgctggcgatgttggcggcgcatagctggcccggcaacgtgcgcgaactcgagaacgtg
atgcgtcgcgctctggtgcttgcagggaacgcctccgtcatcaaggcttcgcacatcgtg
ttcgatcgccctgcccgcctgatcaacgaaccggttgcggttcctgccgcggccgatgcc
aagctttccaacatcgtgcagatgtccgaagcccgcgcgatcctttcgacgctcgaggcc
tgcaacggcagccgcgttgccgctgcccgccagctcggcatttcggaacgcaccttgcgc
tatcgcctcgccagcttccgtgaggccgggattgaagtgaacggccggtcagtggacggt
agagccgtcggtggcaggcgatga
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