Novosphingobium sp. ES2-1: IM701_04380
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Entry
IM701_04380 CDS
T10689
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
novo Novosphingobium sp. ES2-1
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
novo03036
]
IM701_04380
Chromosome and associated proteins [BR:
novo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
IM701_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOV94705
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All DBs
Position
884090..888334
Genome browser
AA seq
1414 aa
AA seq
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MSNSSLAFAFDEPSPPAVATAAQIMASELAAGRALSRSDVTRIMSQHFGGSDALGRWSVR
DAHAALELAQVQHLQAFHQIQLSTPIDEADQFFCCLDDRIPTQTNRSDEQIEWQQFATPP
RLAWLAARACGLIPDELVLEPSAGTGMLAVWATKAGTRLALNEISPLRRDCLTAVFPAAR
VTGHDAELIDELLDPAIIPSVVLVNPPYSHGIERGHDGRTGARHLRSAWNRLAPGGRLVA
IMPEWFDCARFLAGVKGPASLRLNAAVERAFIKNGTGITTRLLVLDKVEGVNEPVAIRTN
AFRQLVDFVDALPARDSRQAATEQSSLPTRSPFRLVAASRRPIPAPGTITRAASMTIGAL
TYEALATTAPLEAQVGHYLPYRPSRIVIDGAAEHPTPLVESVAMGSISAPKPDAVPQLPD
GLIAKGLLSAAQAETLIYAASAHARDLPGRFEPEDKGCSLKASAEGQVYRQGYFLGDGTG
AGKGRQVASVILDRWVRGERHHIWISKNEALLEDARRDWAALGGLPIDIQPLASWKLGTS
IAMRDGILFVTYPTLRSGRNDATRLNQILAWAGDNFDGVIVFDEAHAMANAAGGEGSRGK
VKGSEQGIAGVRLQNLLPRARVLYASATGASDVNNLAYATRLGLWGPETAFASREAFVAD
IRDGGIAAMELVARDLKSLGLYTARALSFAGVEYEILEHRLSEDQIAVYDAYAEAWAIIH
ANLREALEATRIVDSETGGTLNSGAKFAALSIFEGTKQRFFSQLLLSMKLPSLLPAIDAV
VADENAAVVQLISTAEAMLNRRLADLSDEEREALEIDLSPREYVIDYLAKSFPVRLMAVF
TDENGNPRSEPKSDEQGAPILCRSALAARDRMIEQLCALPPIATALDAIIERFGVDQVAE
VTGRTRRLIVGRDGCQKLQSRSPRANVAETQAFMDGAKRILVFSDAGGTGRSYHADLAAK
NQARRVHFLLEPGWRADAAIQGLGRTNRTNQASAPLFRPVTTDVRGERRFISTIARRLDS
LGALTRGQRQTGGQNLFDPADNLESIYAKEALHRWFGLLFTGKLEEVSLGRFQELTGLRI
EAPDGSMVDDLPSIQHWLNRILALPIALQNPIFDEFMGLVEARIDAARQAGTLDLGLETI
AVDDFTVLSDTLLRTDPSSGATTHLLELEIARAVKPFTLKRLEELHGLVGQRQRPVRNAR
SGRVALLVPARSILADDGSRVSRFELLRPLKRSYITEDQLAESNWEGISVDAFREAWTAE
VEEARTSHKRERLYLATGLLLPVWDKLPSDFVRVSRISAADGRSLLGREVPAHCVPELCR
ALGLEREQTLSADDIVQTVLATGRAMEFAGRELLMVKRNLVNGSQRLELTGWSAARLDWY
KVQGCFTEIIRYQTRLFVPIEGAASVIARLASSA
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattcttctctcgcctttgcgttcgatgaaccatcaccgcccgctgttgcgact
gcggcccagatcatggcttcagagctcgcagcaggccgcgcgctgtcacgcagcgacgtt
acgcgtatcatgagccagcacttcgggggcagcgatgctctcgggcgttggtcggtgcgt
gacgcccacgcagctctagagctggcacaggttcaacacctgcaagcgttccatcagatc
cagctctcaaccccgatcgacgaggcggatcagttcttctgctgcctcgatgaccgaatt
ccgacccagaccaatcgcagcgacgagcagatcgaatggcagcaattcgcaacgccgccg
cgcctcgcctggcttgccgcacgggcctgtgggttgatacccgatgagctcgtgctcgaa
ccttcggccggtaccggaatgctcgcagtctgggcgaccaaagccggtacgcgccttgcc
ttgaacgaaatctcgccgctgcgccgcgactgcctgactgctgttttcccggctgcccgc
gtgaccggacatgatgccgagctgatcgacgaattgctcgatccggccatcatcccgagc
gtcgtgctggtgaacccgccgtattctcacgggatcgagcggggccacgatggccgcacc
ggggcgaggcatctgcgatcggcctggaaccggcttgcccccggcggccggcttgtcgcg
atcatgcccgaatggttcgattgcgcgcggtttctggccggagtgaaggggccggcgtcg
ctgcggctcaatgccgcggtcgagcgtgccttcatcaagaatggcaccgggatcaccacg
cgactgctggttctcgacaaggtggaaggcgtgaacgagcccgtcgctattcgcacgaac
gctttccgccagctggtcgattttgtcgatgccttgcctgctcgcgacagcaggcaggcc
gcaaccgaacaatcgagccttccaactcgttcgccgttccgactggtagccgcgtcacgc
agaccgatcccggctccgggaacgatcactcgagctgcgtcaatgaccatcggcgcgctg
acctacgaggcgctcgcaaccactgcgccgcttgaggcacaggtcggccactatctgccc
tatcgccccagccggatcgtgatcgatggcgcggccgagcatccaacgccgctcgtcgag
tccgtcgccatggggtcgatctcggcacccaagccggacgcggtgccgcagctgcccgac
gggcttatcgccaaggggttgctgtctgctgcccaagcagagaccctgatctacgccgcc
agcgctcatgcccgcgatcttcccggtcggttcgagcccgaggacaagggctgttcgctc
aaggcgtcagcagaaggtcaggtctacaggcaaggctatttcctcggggatggcaccggc
gctggcaagggccgccaagtcgcgagcgtcattctcgatcgctgggtacgcggcgagcgc
caccatatctggatttcgaagaacgaggcgctgctggaagacgcgcgccgcgactgggca
gccctaggcggtctcccgatcgacattcagccgctggcgtcctggaaacttggcacctcc
atcgccatgcgcgatggcattctcttcgtgacctacccgaccctgcgttcgggccgaaac
gatgcaacccgcctcaatcagatcctggcatgggcgggcgacaacttcgacggcgtgatc
gtgttcgatgaggcacacgccatggccaatgctgctggcggagaaggctcgcggggcaag
gtcaagggctcggagcagggtatcgctggcgttcgcctgcagaacctcttgccccgcgcg
cgggtgctttacgcttcggcaaccggcgcgtccgacgtcaacaatttggcctatgcgacc
cgccttgggctgtgggggccggagaccgccttcgccagtcgcgaggcgttcgtcgccgac
attcgtgacggcggaatcgcagcgatggagctggtcgcccgggacctcaagtcgctcggc
ctctacaccgcgcgcgcattgtccttcgccggcgtcgaatacgagatcctagagcatcgc
ctgagcgaggatcagatcgcggtctatgatgcctacgctgaagcctgggcgatcatccac
gccaacctgcgcgaagcgctggaggccacgcggatcgtcgatagcgaaactggcgggacg
ctcaactcgggcgccaagttcgcagcgctgtcaatcttcgaaggaaccaagcagcgcttc
ttctcgcagctgctcctgtcgatgaagctgcccagcctgttaccagccatcgacgcggtg
gttgccgatgaaaacgccgcagtcgtccagctgatctcgaccgcagaagccatgctcaat
cgtcggcttgccgacctctcggacgaagaacgcgaagcactggagatcgatctgtccccc
cgggaatatgtgatcgactatctcgccaagagctttcctgtccgcctcatggccgtcttc
accgatgaaaacggcaatcctcgctcagagccgaagagcgacgagcagggtgcgccgata
ctgtgccgatcagcactcgccgcgcgcgaccggatgatcgagcagctctgcgctttgccg
ccgatcgcgaccgcgcttgatgccatcatcgaacgcttcggcgtggatcaggtggcggaa
gtgaccggccggacacgccggctcatcgtcggccgcgatggttgtcagaaactccaatcc
cggtcgccgcgcgccaacgtggctgaaacccaggccttcatggacggggccaagcgcatt
ctggtcttttccgacgccggaggaaccggacgcagctaccatgccgatctggccgccaag
aaccaggctcggcgtgtccacttcctgctcgaaccgggctggcgcgctgatgccgcaatc
caggggcttggccggaccaatcgcaccaaccaggcgtcggccccactgttcagaccggtg
acgaccgatgtgcgcggcgaacgccggttcatctcgacgattgcgcggcgcctggacagc
ctcggtgccttgacgcgcgggcagcgccagaccggcggtcaaaaccttttcgatccggct
gacaatctcgaaagcatctatgccaaggaggcgctccatcgctggttcggcctgttgttc
accggcaagctcgaagaggtcagcctcgggcgcttccaggagttgacaggcctccggatc
gaagcccctgacgggtcgatggtggatgacctgccgtcgatccagcactggctcaatcgc
atcctcgcgttgccgattgccttgcagaacccgatctttgacgagttcatggggctggtc
gaggcgcgtatcgatgccgcccgtcaggccggcacactcgatctcggccttgagaccatc
gcggtcgacgactttacggtcctgtcggacacgctactgcgcaccgatccatcctcgggc
gcgacgacccatctgctggaactggaaattgcccgcgccgtgaagccgtttaccctgaag
cggctcgaggagctccacggcctcgttgggcaacggcagcggcctgttcggaacgcccgc
tcaggtcgtgttgccttgctcgtgcccgcccgcagcattcttgccgatgacggctcgcgc
gtttcccgcttcgaattgctccgcccgctgaagcgcagctacatcaccgaggatcagctg
gctgagagcaactgggagggcatctccgtcgacgctttccgcgaagcctggacagccgag
gttgaggaagcgcggaccagccataagcgcgagcgcctctatcttgcgacgggcctccta
ctgccggtctgggacaagcttccttcggatttcgtgagggtcagtcgcatctcggcagca
gatggccgttcgctcctcggccgcgaggttcccgcccattgtgtgcccgaactgtgccga
gcgctgggtctggaacgcgagcaaactctttccgccgacgacattgtccagaccgtcctg
gcaacgggcagggccatggagttcgcgggccgcgagctgcttatggtcaagcgcaacctg
gtcaatggctcacagcgacttgagcttacgggatggagtgctgctcggctcgactggtac
aaggtccaaggctgctttaccgagatcatccgctatcagacccggctcttcgtgccgatc
gagggcgcggcgagcgtgattgccagactggcatcatcggcatag
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