Novosphingobium sp. ES2-1: IM701_04770
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Entry
IM701_04770 CDS
T10689
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
novo Novosphingobium sp. ES2-1
Pathway
novo00020
Citrate cycle (TCA cycle)
novo00640
Propanoate metabolism
novo00660
C5-Branched dibasic acid metabolism
novo00720
Other carbon fixation pathways
novo01100
Metabolic pathways
novo01110
Biosynthesis of secondary metabolites
novo01120
Microbial metabolism in diverse environments
novo01200
Carbon metabolism
Module
novo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
novo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
novo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IM701_04770 (sucD)
00640 Propanoate metabolism
IM701_04770 (sucD)
00660 C5-Branched dibasic acid metabolism
IM701_04770 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
IM701_04770 (sucD)
Enzymes [BR:
novo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
IM701_04770 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QOV94770
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Position
complement(978080..978970)
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AA seq
296 aa
AA seq
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MSILVDKNTKVITQGMTGKTGSFHTQAALDYGTQMVGGVTPGKGGTTHIGLPQFDTVAEA
KAVTGATASCVYVPPSGCADAILEAIDAEMDLIVAITEGVPVLDMVKVKRALSGSKSRLI
GPNCPGVLTPNQCKIGIMPGSIFKEGSVGVVSRSGTLTYEAVFQTSAIGLGQTTAVGIGG
DPVNGTNFIDVLELFLADEATKSIIMIGEIGGDAEEQAAQFLIDEAKRGRKKPMAGFIAG
RTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIKVSASPSLLGETLAEVLKERV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcattctcgtcgacaagaacaccaaggtcatcacgcaggggatgaccggcaagacc
ggcagcttccacacgcaggctgcgcttgactacggcacgcagatggttggcggcgtgacc
cccggcaagggcggcacgacccacatcggcctgccgcagttcgataccgtggccgaggcc
aaggccgtcaccggtgcgaccgcatcatgcgtctacgtgccgccttcgggctgcgccgac
gccatcctcgaggcgatcgatgccgagatggatctgatcgtggcgatcaccgagggcgtg
cccgtgctcgacatggtcaaggtcaagcgcgcgctgtcgggttcgaagagccgcctgatc
ggtccgaactgccccggcgtgctgacgcccaaccagtgcaagatcggcatcatgcccggt
tcgatcttcaaggaaggctcggtcggcgtggtctcgcgctcgggcacgctgacctatgag
gcggtgttccagacctcggccatcggccttggccagaccaccgcagtcggcatcggcggc
gacccggtcaacggtaccaacttcatcgacgtgctcgaactgttcctggccgacgaagcc
accaagtcgatcatcatgatcggcgagatcggcggcgatgccgaggagcaggccgcacag
ttcctgatcgacgaggccaagcgtggccgcaagaagccgatggccggcttcatcgcgggc
cgcaccgcgcctccgggccgccgcatgggccatgccggcgccatcgtctcgggcggcaag
ggcgatgctgaaagcaagatcgcggccatggaagccgccggcatcaaggtctccgcctcg
ccctcgctgctgggcgagacgctggccgaggtgctgaaggaaagggtgtaa
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